| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_15678 |
|---|
| Symbol | PRPL13 |
|---|
| ID | 5002463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009360 |
|---|
| Strand | - |
|---|
| Start bp | 163710 |
|---|
| End bp | 164637 |
|---|
| Gene Length | 928 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | |
|---|
| GC content | 66% |
|---|
| IMG OID | 640417884 |
|---|
| Product | Plastid ribosomal protein L13 large ribosomal subunit |
|---|
| Protein accession | XP_001418394 |
|---|
| Protein GI | 145347892 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0102] Ribosomal protein L13 |
|---|
| TIGRFAM ID | [TIGR01066] ribosomal protein L13, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0368905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00903198 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTCCC TCGCGCCCGT CCGCGCGCCC ACCGCCGCGC CCAAGCGCCA ACAAGGTACG
TTCGCCATCT CCCGCCCGTC CGCGCGCGCG TCGCGCGTCG TTCGACGCCG CGCGCGCGCG
CGAATCCCGA CGCCGCGCTC GACCGCGGCG TAGGGCTTTT TCGCGCGCGC GCGATGCCCG
ACGACGACGC GACGCGACGC GCCTCGCGCG ATGCGCCGAC GCTCGACGAC GAGAAAAAAA
TATTCGCGCG AATGCGCGTC GTTCGCGACG CTCGAGACGG TCGACTGACG ACGCCGCGCG
ACGTAATCGT CGCTTCGAAT GCGCAGCCGC GAAACCCTCG CCGGGACGAC GATGCGGCGT
GCAGACTCGC GGTCACAGCC TCGGGTCGCT CCCCCCGGAG CTCGGGGTCA CGGCCGAGAA
ACTCGGACGT GACGTGTTTA ACACGACGTA TTACCCCAAG GGTGAGGACG CGGACGCGTC
TCGTAAACCG TGGGTGGTGA TCGACGCCGC CGGGTTGCGA CTCGGACGCC TGAGCACGGT
GGCGGCGACG TACCTGCGAG GCGGGAACTC TGGGTGCTAC ACCCCGGCGT TTAACATGGG
CGTGAACGTG GTCGTGATTA ATGCCGATAA GATTGTCGTG ACTGGGAACA AGGCGAACCA
AAAGTTGTAC TACACGCTCG GCGTCAGAGG TAAGCCGGGG TCGATGAAGG AGGAGACGTA
CGCGAGCCTG CACGCGCGTC AACCGGCGCG AGTGATTGAA AAGGCGATTA AGGGTATGTT
GCCGAAGAAC CGCATGGGAC GGGAGACGTT TACGCATTTG AAGGTGTACG CGGGCGCGGA
TCACCCGCAC GCGGCGCAAA ACCCGACGGA TGTGACGGCG GACGTGAAGG CGGCTACGCA
CAAGGCGCAC ATGCTCGAGG AAGCGTAA
|
|---|
| Protein sequence | MASLAPVRAP TAAPKRQQAA KPSPGRRCGV QTRGHSLGSL PPELGVTAEK LGRDVFNTTY
YPKGEDADAS RKPWVVIDAA GLRLGRLSTV AATYLRGGNS GCYTPAFNMG VNVVVINADK
IVVTGNKANQ KLYYTLGVRG KPGSMKEETY ASLHARQPAR VIEKAIKGML PKNRMGRETF
THLKVYAGAD HPHAAQNPTD VTADVKAATH KAHMLEEA
|
|---|
| |