Gene OSTLU_15678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_15678 
SymbolPRPL13 
ID5002463 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009360 
Strand
Start bp163710 
End bp164637 
Gene Length928 bp 
Protein Length218 aa 
Translation table 
GC content66% 
IMG OID640417884 
ProductPlastid ribosomal protein L13 large ribosomal subunit 
Protein accessionXP_001418394 
Protein GI145347892 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0102] Ribosomal protein L13 
TIGRFAM ID[TIGR01066] ribosomal protein L13, bacterial type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0368905 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00903198 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCTCCC TCGCGCCCGT CCGCGCGCCC ACCGCCGCGC CCAAGCGCCA ACAAGGTACG 
TTCGCCATCT CCCGCCCGTC CGCGCGCGCG TCGCGCGTCG TTCGACGCCG CGCGCGCGCG
CGAATCCCGA CGCCGCGCTC GACCGCGGCG TAGGGCTTTT TCGCGCGCGC GCGATGCCCG
ACGACGACGC GACGCGACGC GCCTCGCGCG ATGCGCCGAC GCTCGACGAC GAGAAAAAAA
TATTCGCGCG AATGCGCGTC GTTCGCGACG CTCGAGACGG TCGACTGACG ACGCCGCGCG
ACGTAATCGT CGCTTCGAAT GCGCAGCCGC GAAACCCTCG CCGGGACGAC GATGCGGCGT
GCAGACTCGC GGTCACAGCC TCGGGTCGCT CCCCCCGGAG CTCGGGGTCA CGGCCGAGAA
ACTCGGACGT GACGTGTTTA ACACGACGTA TTACCCCAAG GGTGAGGACG CGGACGCGTC
TCGTAAACCG TGGGTGGTGA TCGACGCCGC CGGGTTGCGA CTCGGACGCC TGAGCACGGT
GGCGGCGACG TACCTGCGAG GCGGGAACTC TGGGTGCTAC ACCCCGGCGT TTAACATGGG
CGTGAACGTG GTCGTGATTA ATGCCGATAA GATTGTCGTG ACTGGGAACA AGGCGAACCA
AAAGTTGTAC TACACGCTCG GCGTCAGAGG TAAGCCGGGG TCGATGAAGG AGGAGACGTA
CGCGAGCCTG CACGCGCGTC AACCGGCGCG AGTGATTGAA AAGGCGATTA AGGGTATGTT
GCCGAAGAAC CGCATGGGAC GGGAGACGTT TACGCATTTG AAGGTGTACG CGGGCGCGGA
TCACCCGCAC GCGGCGCAAA ACCCGACGGA TGTGACGGCG GACGTGAAGG CGGCTACGCA
CAAGGCGCAC ATGCTCGAGG AAGCGTAA
 
Protein sequence
MASLAPVRAP TAAPKRQQAA KPSPGRRCGV QTRGHSLGSL PPELGVTAEK LGRDVFNTTY 
YPKGEDADAS RKPWVVIDAA GLRLGRLSTV AATYLRGGNS GCYTPAFNMG VNVVVINADK
IVVTGNKANQ KLYYTLGVRG KPGSMKEETY ASLHARQPAR VIEKAIKGML PKNRMGRETF
THLKVYAGAD HPHAAQNPTD VTADVKAATH KAHMLEEA