Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_38424 |
Symbol | |
ID | 5001888 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009359 |
Strand | - |
Start bp | 508503 |
End bp | 509324 |
Gene Length | 822 bp |
Protein Length | 256 aa |
Translation table | |
GC content | 58% |
IMG OID | 640417309 |
Product | predicted protein |
Protein accession | XP_001418030 |
Protein GI | 145347130 |
COG category | [S] Function unknown |
COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.257444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00184169 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGAGTACG TCTCCGACGG CGGCGTCGAA ACGCTGAGCA TTCTTCGTTC GTCGTCCACG CCGCGTGAAA TTTATCTGGT CGGCACCGCG CACGTGAGCG AGCGAAGCGC GAGGGAGGTT CGCGAACTCA TCAGACTGGT CAAGCCGAGC GTAGTCCACG TCGAGCTCTG CGAGCAGCGA TTGCGGACGA TGCGCGAGCG CATCGTGGAC GACGAAGAGA AGAAACCGGG TGAATCGGCG TCGAACGGCA AATCGGCGTT CGTTCAACAG GCGGTCAAAG ATTTTCTCGG GGCGTTCGCG GGCGGCAACG TCGGCGACGG TTTGCTGCAG GCGGCGTTTA AAACATTCTA TAGCTTCTTC AAATTGAGCG GACTCGACCC CGGCGCTGAG TTTAAGGAAG CAGTAAAAGA GGCGGGTTGC ATTGGGGCGA AGATCGTGTG CGCGGACAGA GACGTGACGA TGACTTTGCG CCGGCTACGC GAAAGCGTGA CAACGATGGA CGTCATGGCC ATCGTGATGG GTCGTACGCG ACCGGGCGGT CCTCCGCCGC CGAGCGCTAT GGGTGGATCC ATGGATAACA TCGAACACAT CGTTGAAAAT CTCAAGACGC GGAGGCACAT TCGTGAGATG CGCGAATATT TGGCATATCA GATGCCCAAA ATCGCGCGAG TCTTTGTGGA CGAACGCGAC GAAATAATGG TCGAAGCTTT ACTTCGGTGC AAAGGCGAGC GCGTCGTCGC CGTCGTCGGC ATGGCTCATA TGGATGGCAT CGAGCGACGA TGGGAAGAAG CGCAGAAACG CCTTCGTTTG AAAGTTGGTT AG
|
Protein sequence | MEYVSDGGVE TLSILRSSST PREIYLVGTA HVSERSAREV RELIRLVKPS VVHVELCEQR LRTMRERIVD DEEKKPDFLG AFAGGNVGDG LLQAAFKTFY SFFKLSGLDP GAEFKEAVKE AGCIGAKIVC ADRDVTMTLR RLRESVTTMD VMAIVMGRTR PGGPPPPSAM GGSMDNIEHI VENLKTRRHI REMREYLAYQ MPKIARVFVD ERDEIMVEAL LRCKGERVVA VVGMAHMDGI ERRWEEAQKR LRLKVG
|
| |