Gene OSTLU_38424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_38424 
Symbol 
ID5001888 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009359 
Strand
Start bp508503 
End bp509324 
Gene Length822 bp 
Protein Length256 aa 
Translation table 
GC content58% 
IMG OID640417309 
Productpredicted protein 
Protein accessionXP_001418030 
Protein GI145347130 
COG category[S] Function unknown 
COG ID[COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.257444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00184169 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGTACG TCTCCGACGG CGGCGTCGAA ACGCTGAGCA TTCTTCGTTC GTCGTCCACG 
CCGCGTGAAA TTTATCTGGT CGGCACCGCG CACGTGAGCG AGCGAAGCGC GAGGGAGGTT
CGCGAACTCA TCAGACTGGT CAAGCCGAGC GTAGTCCACG TCGAGCTCTG CGAGCAGCGA
TTGCGGACGA TGCGCGAGCG CATCGTGGAC GACGAAGAGA AGAAACCGGG TGAATCGGCG
TCGAACGGCA AATCGGCGTT CGTTCAACAG GCGGTCAAAG ATTTTCTCGG GGCGTTCGCG
GGCGGCAACG TCGGCGACGG TTTGCTGCAG GCGGCGTTTA AAACATTCTA TAGCTTCTTC
AAATTGAGCG GACTCGACCC CGGCGCTGAG TTTAAGGAAG CAGTAAAAGA GGCGGGTTGC
ATTGGGGCGA AGATCGTGTG CGCGGACAGA GACGTGACGA TGACTTTGCG CCGGCTACGC
GAAAGCGTGA CAACGATGGA CGTCATGGCC ATCGTGATGG GTCGTACGCG ACCGGGCGGT
CCTCCGCCGC CGAGCGCTAT GGGTGGATCC ATGGATAACA TCGAACACAT CGTTGAAAAT
CTCAAGACGC GGAGGCACAT TCGTGAGATG CGCGAATATT TGGCATATCA GATGCCCAAA
ATCGCGCGAG TCTTTGTGGA CGAACGCGAC GAAATAATGG TCGAAGCTTT ACTTCGGTGC
AAAGGCGAGC GCGTCGTCGC CGTCGTCGGC ATGGCTCATA TGGATGGCAT CGAGCGACGA
TGGGAAGAAG CGCAGAAACG CCTTCGTTTG AAAGTTGGTT AG
 
Protein sequence
MEYVSDGGVE TLSILRSSST PREIYLVGTA HVSERSAREV RELIRLVKPS VVHVELCEQR 
LRTMRERIVD DEEKKPDFLG AFAGGNVGDG LLQAAFKTFY SFFKLSGLDP GAEFKEAVKE
AGCIGAKIVC ADRDVTMTLR RLRESVTTMD VMAIVMGRTR PGGPPPPSAM GGSMDNIEHI
VENLKTRRHI REMREYLAYQ MPKIARVFVD ERDEIMVEAL LRCKGERVVA VVGMAHMDGI
ERRWEEAQKR LRLKVG