| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_37445 |
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| Symbol | |
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| ID | 5001150 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009358 |
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| Strand | + |
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| Start bp | 113310 |
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| End bp | 116225 |
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| Gene Length | 2916 bp |
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| Protein Length | 938 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | 640416571 |
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| Product | predicted protein |
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| Protein accession | XP_001417148 |
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| Protein GI | 145345288 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | [TIGR00604] DNA repair helicase (rad3) |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.258887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCGCG ACGAAGATTG CGACCTGAGT CCGCGCGAGA TCGCGTCGCC GCGCGACGCC
GACGACGAGG GCGATGATGT TCGCGTCGTG TGCATCGACG AAGGCGACGA CGCGACGCCG
CGCGCGCGCG CGTCCGCGGA CGCGCCGGAC GCGACGACGT CGACGCGAGC ATTCCCAGGC
GCGTCCACGG CGCCGGACGC GCGCGCGGCG CGGTTCAAAC CGGAACTGAG CGTCAAGTCG
TACTTTAAGA AGATTGAACC AAACGACGCG ACGCGCGACG GCGACGCGAC GACGCCGGAG
GACGCCTCGC CGAAGCGTCG GCGAGGGTTG GTGAAGATTG AATTCGAAAA GGACAGGCGC
GAATTCACGA CGAAGGCGAT CGGGGGATGT AAGGTGAAGT TTCCGGAGGG ACTGAATCCA
CATCCGGCGC AGACGATGAC GATGTCGAGC ATCATTCGAG CGTTGACGAA ACGCGAGCAC
GCGATGATTG AGTCGCCCAC GGGGACGGGG AAAACGTTAG CGCTGTTGTG CGGGGCGTTG
GCGTGGCAGG AACGAGAGGT GGCGCTTTCG ATGGAGAAGA ACAAGGGCTA TTGGTCGGAA
AAGATGAAGT ATCAAACGGC GCGGAACGCG TACAAAGACG CGGTGGAGAA CGGGAAGACG
CCGACGGTGG AGCGCGGCGT CGGTTGGGCC TCGAATGATC CGTATTTTCC GAATCCGCAC
GGTTCGACGC TCCGACCGAA GATTTTCATC TGTTCGCGAA CGCATTCGCA GATTAATCAA
ATTTTGCGTG AACTCAAGCG AACGGGGTAT TCGCCGCGGT ACAGCGTGCT GTCCTCGAGA
CAACGGATGT GCCCGATGGA AAAGAACGAC GCGCAGTGCA AAGAATTACT CGGCACTGGA
GTGGCTCAAC AGAGCGGTCG CACGGCGTGC GGGTTTTTCA ATCGACACAA GCACGTGTCG
TCGAACATGG AGCGATACCC GAAGGCGGGC GAAGAAGGCA TGTTTCCGAG CGCGTGGGAC
ATGGAAGACT TTGAGCGCGT CGTGAATGAA ATCGAAGGTT GTTCGTTTTA CGCGCTTCGC
GAGATGGTGA AGACCGCGGA TTTGATCTTT TGCCCGTACA ATTATCTGTT TGACGTGAAC
ATTCGACGAA AGATGAAGAT AGATCTGAAG GACGCCGCCG TCATCATCGA TGAAGGGCAC
AATCTTGAAG ACGTGTGCAG AGAAGGTTCG TCGATTGAGT TTTCGCTCGA CACCATCGGA
AAAGGTATGG ATGAGTTGTC GAAGACTTGG GGGAAAATCA ACAACGAAAC GAGTTTGATC
GCCAGATTCT TTCGAGCGAT TTCCGCGTTC ATGGAGGGTC TTTTCTGCAC CAACACCGCG
CCGACGACGG TGATTCAATC GAACCAGCTC GAGTACTTCG TAAACGACAT GCTGAAAACA
TTCAACGCGG TGGGTGAGTA CACGCAGGAC ATCATAGACG TCGTAGAAAA GTTACTCACT
GAGGACAGCA ATTTGATGTC GCCTATCATC GCGCCGCACA TTACGTTCGC CGGAGATCTA
GCCGAAGTTT TGCAAAACGC CGTCAAGCAC GCGGCTGCGT ACAACATTTT CATCGGCTCG
CGGGTTGAAA TCGACGGCGA TGAATGTCCA GGTATGGTGA TTCAGTGCAT GAAGCCGTCA
GTCGCGTTTC ACGCCGTTGC GGAGAAAGCG CGCTCGGTAA TCATCACCTC TGGTACGTTG
TCGCCGATGA ATACGTTCGA GGCGGAGCTC GCCGAGAAGT TTCCGACGAA AATCGAAGCG
CCCCACGTGG TGCCAAACGA TCACGTGTAC GTCGAAGTGA CGAGCGCGAT TGGCGAGGTG
ACGTACAAGG CGACAGATGG ACACGTCCAA GGACCGAAGT TCGCGAAAAA GTTGGGCGAA
TACTTGTTGA AATACGCTCA AGTCATCCCG GGAGGGATGC TCGTGTTTCT TCCAAAGTAT
AGTCTCATCG ACCGCGTCTT GCGCGAATGG CACGTGACTG GTTTGTTTGG GAAGATGAAC
GATTACAAAC GCGTCGTCGT GGAAACGCGG GGCGCGCGAG GTTTCCAGGA CACCCTGAAC
GAATTCAATC TCGGAAACAC GAACGGTAAA GGATCGTTGA TGCTTGCCGT GTACCGCGGT
AAAGTGTCCG AAGGTATCGA TTTCAAAGAC GACAGCGCGC GGGCTGTGTT TTGCGTCGGC
ATTCCGTTTC CGAGCGTCTA CGACATCAAG GTGAAGGCGA AGAAAGAATT TAACGATTTA
CCCGTTTCTC GAGCGCAAGG CATGCTATCG GGCGGCGAGT GGTACCGCGC GCAGGCGTAC
CGCGCGTACA ACCAAGCGCT CGGTCGTTGC ATTCGCCATC CGAAGGATTA CGCCGCGTTG
TTCCTCGTCG ACTCGCGTTT TCGCGAAAGT CGTTGGATGC TGAACAACAT CTCTAAATGG
ATTCGCAACA ACGCGCAGGC GTCCGACGAC GTCAATCAAA GCGTGCGAGT GGTGGATGGA
TTCTTTAAGC GCCTTCGCGG CGCATCCGAC GGAAACGCGC CGGCGGGGTC GACGGCAAAG
CACGAGGAAA CTCAACAAAA AGAAAATCTC CTCTGCGGCC TGGGGTGCGA GAAAAACGCC
GCGCTCTGCG CCGCGCTCGA GAGACTCCAC GAAGCGAGTA TGCTTTCGCC CGAGGAGCCG
ATGAAAGTGA ACGCGTATGC GAAAGCGTTG ACGTCCATTC GCGCGTTGAA GTACGAAGTC
ACGAGTGGCG CGAAGATGAG TAAAGCGGGT CCCGACAAAG TGCAGCACGT CGGACCGTCC
ATGGGCGCGC AAATCGATTT CTTTCTCAAG CACGGCGTCT TCGAACGAAT GGAGTATTAC
GAGCGCAAAG AGCTTCCCCC GTCGTCGGCG AAGTAG
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| Protein sequence | MSRDEDCDLS PREIASPRDA DDEGDDVRVV CIDEGDDATP RARASADAPD ATTSTRAFPG
ASTAPDARAA RFKPELSVKS YFKKIEPNDA TRDGDATTPE DASPKRRRGL VKIEFEKDRR
EFTTKAIGGC KVKFPEGLNP HPAQTMTMSS IIRALTKREH AMIESPTGTG KTLALLCGAL
AWQEREVALS MEKNKGYWSE KMKYQTARNA YKDAIFICSR THSQINQILR ELKRTGYSPR
YSVLSSRQRM CPMEKNDAQC KELLGTGVAQ QSGRTACGFF NRHKHVSSNM ERYPKAGEEG
MFPSAWDMED FERVVNEIEG CSFYALREMV KTADLIFCPY NYLFDVNIRR KMKIDLKDAA
VIIDEGHNLE DVCREGSSIE FSLDTIGKGM DELSKTWGKI NNETSLIARF FRAISAFMEG
LFCTNTAPTT VIQSNQLEYF VNDMLKTFNA VGEYTQDIID VVEKLLTEDS NLMSPIIAPH
ITFAGDLAEV LQNAVKHAAA YNIFIGSRVE IDGDECPGMV IQCMKPSVAF HAVAEKARSV
IITSGTLSPM NTFEAELAEK FPTKIEAPHV VPNDHVYVEV TSAIGEVTYK ATDGHVQGPK
FAKKLGEYLL KYAQVIPGGM LVFLPKYSLI DRVLREWHVT GLFGKMNDYK RVVVETRGAR
GFQDTLNEFN LGNTNGKGSL MLAVYRGKVS EGIDFKDDSA RAVFCVGIPF PSVYDIKVKA
KKEFNDLPVS RAQGMLSGGE WYRAQAYRAY NQALGRCIRH PKDYAALFLV DSRFRESRWM
LNNISKWIRN NAQASDDVNQ SVRVVDGFFK RLRGASDGNA PAGSTAKHEE TQQKENLLCG
LGCEKNAALC AALERLHEAS MLSPEEPMKV NAYAKALTSI RALKYEVTSG AKMSKAGPDK
VQHVGPSMGA QIDFFLKHGV FERMEYYERK ELPPSSAK
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