Gene OSTLU_86671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_86671 
Symbol 
ID5000636 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp312563 
End bp313600 
Gene Length1038 bp 
Protein Length345 aa 
Translation table 
GC content53% 
IMG OID640416057 
Productpredicted protein 
Protein accessionXP_001416620 
Protein GI145344190 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0042] tRNA-dihydrouridine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.658611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCC CGGATGGTGC GCGCGAGTTT TACACCGGGA AGAACGTGTG CGCGCCCATG 
GTGCGCATCA GCACCCTGGC GACGAGGCTC TTGGCGCACG AATACGGCGC AGACTTGGTG
TACGGGGAGG AACTCGTGGA CAAGCGTTTC ATGCACTGCA GGCGGATATT AAATAAAGAG
CTCGGAAGCG TTGATTTTAT CGACGCCAAG GGCACGCTGA CATTCCGCAC GGTGCCAGAG
GAGCGCGAGC GCGTGGTGTT TCAGGTTGGA ACTTCTTCGG CGGCTTCGGC TCTGAAGAGC
GCGGAACTCG TCGCCAGGGA CGTAGCGGCG ATTGACGTTA ATATGGGGTG TCCCAAGCAT
TTCAGCACGT CCGGTGGGAT GGGTGCGAGA CTGTTGAGCC AGCCTGAATT GGTAAGAGAC
ATATTGACCA CGTTGAGGAG GAATCTGCCA TCGACGACAC ACGTGACTTG CAAGATACGG
CTGCTTGAGA GCGAGAGAGA GACAGCAGAG TTGGCGAAAA TGATAGAATC TTGCGGAGTC
TCTGCATTCG CAGTGCACGG CCGTTATATT CCACAGCGTC CACGCGAGCC AGCGCACTGG
AATCTTATAA AGAACGTCGT TGAAGCGGTC GACTGTCCCG TCATTGCAAA TGGCGATGTG
GAATGTTACG AAGATTTTGC GAGAATTAGA GCCCAAACAG GCGCGGCTAG TGCCATGTGC
GCAAGGGGAG CACAGTGGAA CCTTTCGATA TTTCGTCCAG AAGGCATGCT ACCGATTGAT
GTGGTAAAAA AGCACTTTGT TCAAAGAGCA ATCGAGTATG ACAATCCGTG GAACTTTACA
AAGTTTCAGT TGCGAGAGAT TTTAGTTCAC AACAAGCGCA TGGCTTCTGA TGAGGGACAA
TGTCTCAATA AGTGCAAAAC ATGGGATGAA CTCGCGGAGC TTTACTCGTT AGAAGACGTG
CTGAAGGAGA GCCGAGAGAA GCGTCGGCGA GCCGCACTTC GAGACGACGA CGAATACACT
GACACCGTTC ATCCATAG
 
Protein sequence
MAAPDGAREF YTGKNVCAPM VRISTLATRL LAHEYGADLV YGEELVDKRF MHCRRILNKE 
LGSVDFIDAK GTLTFRTVPE ERERVVFQVG TSSAASALKS AELVARDVAA IDVNMGCPKH
FSTSGGMGAR LLSQPELVRD ILTTLRRNLP STTHVTCKIR LLESERETAE LAKMIESCGV
SAFAVHGRYI PQRPREPAHW NLIKNVVEAV DCPVIANGDV ECYEDFARIR AQTGAASAMC
ARGAQWNLSI FRPEGMLPID VVKKHFVQRA IEYDNPWNFT KFQLREILVH NKRMASDEGQ
CLNKCKTWDE LAELYSLEDV LKESREKRRR AALRDDDEYT DTVHP