Gene OSTLU_8424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_8424 
Symbol 
ID5000984 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp437372 
End bp437941 
Gene Length570 bp 
Protein Length160 aa 
Translation table 
GC content58% 
IMG OID640416405 
Productpredicted protein 
Protein accessionXP_001416948 
Protein GI145344872 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.339927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0315766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
CTGATAGGAC TGAATGGGGC GGTGTATTAC GCCTGGGCCA CGACCGAGGA CGGGCGGTTC 
ATGCGGAAGA ATTTCATGGT GAGCGAGGAG GCGCTCGCGC ACGGGCGATG GCACACGATG
TTGACTTCGG CGTTTTCTCA TTTTGATTTG ACGCATCTGG GAATGAACAT GATCGCGCTG
TACTTTTTCG GGCGAAGCGT GTGCGAGCGA TTCGGAGGTC GGTATTTGCT CACGCTGTAT
TGCGTCGGGG GCGTCGGGGC TTCGGCCGCG CACGTGGCGT GGTGCGCGAG GCAACGACGC
AAACGAATGG AGCGGTACAA GGAGGGCCGA GGGAACTTCT TCGACCGTCT CGACGCGTAC
GTCGCTAGGT TCGTAGAAGA TAGCGGTGCG AAGCGAGGGT ATTACTTCAC TCCCGCCGCT
CTCGGAGCGA GCGGGGCGGT GAACGCGATC GTGGCGTTCG AGGTGTTGCT TTACCCACTG
CGGACGATTT ACCTTTACGC GATCGTACCA GTGCCTAGCA TACTACTAGG AGGTTTATTC
CTCATGAGAG ATATCGTGGG CATTCAAGAT
 
Protein sequence
LIGLNGAVYY AWATTEDGRF MRKNFMVSEE ALAHGRWHTM LTSAFSHFDL THLGMNMIAL 
YFFGRSVCER FGGRYLLTLY CVGGVGASAA HVAFVEDSGA KRGYYFTPAA LGASGAVNAI
VAFEVLLYPL RTIYLYAIVP VPSILLGGLF LMRDIVGIQD