Gene OSTLU_34409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_34409 
SymbolRPL12 
ID5000813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp886826 
End bp887326 
Gene Length501 bp 
Protein Length166 aa 
Translation table 
GC content59% 
IMG OID640416234 
ProductRibosomal protein L12, component of cytosolic 80S ribosome and 60S large subunit 
Protein accessionXP_001416788 
Protein GI145344539 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.355279 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTA AGTTCGACCC GAACTCCGTT TTGGAGATTT TCATGCGCGC CACCGGCGGT 
GAAGTCGGCG CTGCGTCTTC GCTCGCGCCG AAGATCGGTC CGCTCGGTTT GTCGCCGAAG
AAGGTCGGGG AAGACATCGC GAAGGAAACC GCCAAGGACT GGAAGGGTTT GCGCGTGACG
GTGAAGCTCA CCGTGCAAAA CCGTCAAGCG AAGGTGTCTG TCGTGCCGAC GGCCTCCGCC
TTAGTCATTA AAGCGCTCAA GGAGCCGTTC CAAGACCGCA AAAAGGTCAA GGGTATCTTG
CACACGGGCA ACTGCTCTTT GGACGACATC ATCGAAGTCG CGCGCACTAT GCGCCCGAGG
TCTTGCGCCA AGTCGCTCGC CGGTACCGTC AAAGAAATTC TCGGTACGGC CAAGTCTGTG
GGCTGCACCG TCGAGGGCGA AGACCCGTCG GACGTGCAAG AATCGATCGA TTCCGGGGAC
ATTGAAATTC CGGAAAAGTA G
 
Protein sequence
MPPKFDPNSV LEIFMRATGG EVGAASSLAP KIGPLGLSPK KVGEDIAKET AKDWKGLRVT 
VKLTVQNRQA KVSVVPTASA LVIKALKEPF QDRKKVKGIL HTGNCSLDDI IEVARTMRPR
SCAKSLAGTV KEILGTAKSV GCTVEGEDPS DVQESIDSGD IEIPEK