| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_33985 |
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| Symbol | PDF1B |
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| ID | 5001130 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009357 |
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| Strand | - |
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| Start bp | 951942 |
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| End bp | 952898 |
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| Gene Length | 957 bp |
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| Protein Length | 240 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | 640416551 |
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| Product | Peptide deformylase, organellar |
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| Protein accession | XP_001417104 |
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| Protein GI | 145345192 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.633615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCGGT GCGCGTGTAA AGTGGCGTCG TGCTCGTCGA GGGTGACGAC GACGACGACG
CGGCGCGGCG CCGCGGTCGT CGCGCGCGGG AAGAAGAAGG GTTTCTTGTT CGGCGAGGTG
GAAAACTTGA GTCGCGAGGG CGAGGGGACG AAGGGCGACG ACGAGGACGC GAAGAGCGTT
CGATGGAGCG AACCGCTGGC GATCGCGAAG TACCCGGCGA AGTGCCTGCG GGCGAAGAAC
GCGCCCGTGG AGACGTTCGA TAAAAATTTG GAACGGTTGA GCAAGGCGAT GTTTAAGATT
ATGTACGAAA CCGTCGGCTG CGGATTGGCG GCGCCGCAGG TGGGTGTGAA TTATCGAATG
ATGGTGTACA ACGAGGCGGG AGAGCCAGGA CAGGGGCGAG AAGTGGTGTT GTGTAACCCG
GAAATAGTGA AGTTTTCCAA GGAGAAGGAT TTGTTCGAGG AAGGGTGCTT GAGCTTTCCG
AAGATGTACG CCGACGTCGA GGTGCGTATC GAGCGACGGC GCCGCGCGCG ATTGTCGCGT
CACGCGCGAG ACGAGAGAGC CGATGACGAT CAAAACATAA ATATACGCTA ATCCGAGACC
CGCGTGCGGG TCGTGCGGAG AAATGTGAGC TAATACGCGA GGCTAACTCT GACGCGCCGC
CGCCGCCGTC GGCGTCGGGA GATTTTGCGT CGCGCGAGAC TGACCGCTTC GCTCTTCCTC
GATTCACGCG CGCAGCGCCC GATCGGCGTT CAAATCGAAG CGCAAAACTT GAAGGGTAAA
AAATTCAAAA TGACCCTCGA AGGGTTCGAG GCGCGCGTGT TCCAGCACGA GTACGACCAT
TTAGACGGCG TCTTGTACCA CGACAGAATG TCGCCCGAGG TCCGCGCGAG CGTGCAGAGC
ACGCTCGATG GATTCGTCGA GGCGTATCCG GGCGAAGATA GCGAAAAGGC GTTGTAG
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| Protein sequence | MTRCACKVAS CSSRVTTTTT RRGAAVVARG KKKGFLFGEV ENLSREGEGT KGDDEDAKSV
RWSEPLAIAK YPAKCLRAKN APVETFDKNL ERLSKAMFKI MYETVGCGLA APQVGVNYRM
MVYNEAGEPG QGREVVLCNP EIVKFSKEKD LFEEGCLSFP KMYADVERPI GVQIEAQNLK
GKKFKMTLEG FEARVFQHEY DHLDGVLYHD RMSPEVRASV QSTLDGFVEA YPGEDSEKAL
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