Gene OSTLU_3240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_3240 
Symbol 
ID5001133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp930686 
End bp931975 
Gene Length1290 bp 
Protein Length430 aa 
Translation table 
GC content62% 
IMG OID640416554 
ProductMFS family transporter: hexose 
Protein accessionXP_001417096 
Protein GI145345175 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00879] MFS transporter, sugar porter (SP) family 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0959044 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTCGCCGTCG CCGCACTCGG GGCGTTTTCG TTTGGGTATC ACTGCGGCGT CGTGAATCCG 
GCGCTGGAGG CGCTGGCGAG CGATATCGGC ATCGCGCGAG ACGTCGCGGC GAAAGGAGCG
GTGGTGTCGA GCATGCTCAT GGGCGCGGCG TTCGGGTCGT TCGCCGCGGG GGCGTCGGCG
GATAAATTTG GACGGAAAAA GTCGCTGGCG CTGGCGGGCG TCGCGCTGGC GCTGGGAAGC
GCGGCGTGCG CGGCGGCGAC GACGCTGCGG ACGATGCTCG CCGGACGCGC GATCGTGGGC
GTGGGCGTCG GATTGGTGTC GATTTTGGTG CCCATGTACG TGAGCGAACT GAGTCCGCCC
GAGCACCGTG GGGTGCTGGG ATCGGGGCCG CAACTGTCCA TCGGATTTGG GATTTTGGTC
GCCATGTTTC TCGGTTTGCC TTTGCAAGGC GTCGACGTCG ATCCCGCGTG GTGGCGCACG
ATGTTCTGGC TCGCCACCGT TCCCGCGGTC GCGCTCGCGA CGCTCGCGAA CGGAATCCCG
GAAAGTCCGT CGTGGTTGCG CTCCAAAGGG CACTTTCAAG AGGCGGACGC GGTGGAGTCT
AAGCAATTCG GAGCCGTGGC GCCGAAGCGC GCCGACGACA TGGGATCGAC CAAGGTGGCG
ACGTGGCAAG AGACTCTGCA AGGGCGCTCG AATCGTCGAG CCGTGATTAC GGGGCCGATG
CTGTTCTTCA TTCAACAATT TGCCGGCATC AACGCCATCA TCTACTTCAG CACGGCCATC
TTCCAAAGCG CCGGGATCGA ATCTGGCGTA CTCGCCTCCG TCGCGGTGTG CGTGGTGAAC
ATCGTAGGCA GCGTCATCGC TACCGGTTTA CTCGATAAAA CGGGTCGTAA ACCGCTTCTC
ATGTACTCTT TCCTCGGTAT GGCGGTAAGT TGCGTCGGTT TGGCCATCGC GGGCGCGTTT
CCAGCGATGG TCATGGCGCC CGCGCTGTCG CTGTTTTCCG TCCTCTCGTA CGTCTTCATC
TTCGGCATGG GCGCCGGTCC AGTTCCGGGT CTGCTATCTT CGGAGATTTT CGCTCCGGCC
GTGCGCGGGA AGGGGATGTC TTTGTGCTTT CTCGCGCACT GGATCTTCAA CTTCTGCATT
GGACAGGGAT TTTTACCGGC GGTGGAGTAC TTCGGCGCTA GCGTCGTGTA CATGTTTTTC
GCGGCGTTTT CGATGTTTGG GTTCTTTTTC ACTCAAGCAT ACGTCGTGGA GACAAAAGGC
AAGTCATTGG AGCAGATCGC GGTCGAGCTT
 
Protein sequence
VAVAALGAFS FGYHCGVVNP ALEALASDIG IARDVAAKGA VVSSMLMGAA FGSFAAGASA 
DKFGRKKSLA LAGVALALGS AACAAATTLR TMLAGRAIVG VGVGLVSILV PMYVSELSPP
EHRGVLGSGP QLSIGFGILV AMFLGLPLQG VDVDPAWWRT MFWLATVPAV ALATLANGIP
ESPSWLRSKG HFQEADAVES KQFGAVAPKR ADDMGSTKVA TWQETLQGRS NRRAVITGPM
LFFIQQFAGI NAIIYFSTAI FQSAGIESGV LASVAVCVVN IVGSVIATGL LDKTGRKPLL
MYSFLGMAVS CVGLAIAGAF PAMVMAPALS LFSVLSYVFI FGMGAGPVPG LLSSEIFAPA
VRGKGMSLCF LAHWIFNFCI GQGFLPAVEY FGASVVYMFF AAFSMFGFFF TQAYVVETKG
KSLEQIAVEL