Gene OSTLU_30430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30430 
SymbolRPS20 
ID5000563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp179311 
End bp179688 
Gene Length378 bp 
Protein Length125 aa 
Translation table 
GC content60% 
IMG OID640415984 
ProductRibosomal protein S20, component of cytosolic 80S ribosome and 40S small subunit 
Protein accessionXP_001416866 
Protein GI145344703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0051] Ribosomal protein S10 
TIGRFAM ID[TIGR01046] ribosomal protein S10(archaeal)/S20(eukaryotic) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0524251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCG CCGCCGCCGC GCCGTACAAG GCGCCCGCCG CGAAGACTGA AGAGTCGACG 
CAGCAGATGC ACCGCATTCG CATCACGCTC ACGTCTCGTA ACGTGAAGAA CCTCGAGAAG
GTGTGCGCGG ATCTCATTCG CGGGGCGAAG GATAAGCGGT TGAAGGTGAA GGGCCCGGTG
CGCATGCCGA CGAAGGTTTT GAAGCTCACC GTGCGCAAGT CGCCGTGCGG GGAAGGTACG
AACACTTGGG ATCGCTTTCA AATGCGCATC CACAAGCGTT TGATCGACTT GCACTCGCCG
GCGGACGTGG TGAAGCAAAT CACGTCAATC TCCATCGAAC CGGGCGTGGA GGTTGAGGTG
ACGATCGTCG ACAACTAG
 
Protein sequence
MSAAAAAPYK APAAKTEEST QQMHRIRITL TSRNVKNLEK VCADLIRGAK DKRLKVKGPV 
RMPTKVLKLT VRKSPCGEGT NTWDRFQMRI HKRLIDLHSP ADVVKQITSI SIEPGVEVEV
TIVDN