Gene OSTLU_30385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_30385 
Symbol 
ID5001042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009357 
Strand
Start bp97274 
End bp98653 
Gene Length1380 bp 
Protein Length459 aa 
Translation table 
GC content66% 
IMG OID640416463 
ProductMOP(MATE) family transporter: multidrug efflux 
Protein accessionXP_001416845 
Protein GI145344659 
COG category[V] Defense mechanisms 
COG ID[COG0534] Na+-driven multidrug efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCGG CGCTGGCGAT GGCGCTGGCG CTGGTGAGCG GGACGGCGAG CGCGATCGCG 
TGCGCGGCGA CGCTGACGCC GAGCGCGCGA GGCGCGTTTC GGTTGACGCC GGAAGTCGCG
GCGCTGGCGA ACGAGATGTT CCCGTGGGTC CTGGGCGCGA CGCCGTTCGC GATGGCGTTC
GAGAGCGCGA TGGGGACGGT GTGCGGGATC GGCAGGGTGG AGACGGCGAC GCGGTGGTCG
GCGGGAAAGG CGGCGGCGGA CGCGGCGGCG ACGCTCGCGG CGCTGGGGCT GGGGAGGGGA
GACGCGGCGA AGATGCGGTG GATCGGCGTC GGAACGTTCG CGGTGAGCGT CGCGCAGGCG
GGATTGGGGT GGTGGTTGGT GTCGACGACG ACGCCGCGAG GTTGGGACGA GCCGCTCGCG
CCGCGAGCGA CGTCGGCGAG ACGGTTGGGC GCGGCGGAGA CGTTTGGATT TTTGGCGAAC
GGCGCGAGCA TGGTGGCGCG GTCGATTTTG TTGCAGAGCT CGTTCTTCGT CGCGGTGGTC
GTCGCCGCGA GGAACTTGGA GCCGAGCGGA TTGGCGGCGC ACCACATCGT CGTGTCGCTG
TGGATGGTGT GCTCGTACGT CGTCGACGGA TTCGCGACGT GCGCGACGGT GATCGGGTCG
CGTTTGTTCG GCGCCGGTCG AAAGGATGAG CTCGTGCGAT TGTCGCACAC GCTCGTCGCG
TGGGGCGTCG TCACCGGATT CGTCTTCAGC GCCGCGCTCG TGGCGGGCGA ATCGGCGATT
CCGAGCGTGT TCACGCGCGA CGCGAAAACG AAAGAGGCGC TGCTCGGCTC GGGGGTGTGG
CGAGTGCTCG TGCTCGCGCA GCCGATCAAC GCGGCGGTTT TCGTGTATGA TGGATTCATC
TACGCCACGC ACAGTTTCTC GTTCGTTCGC GAAGTCATGG CCACCGGGGT TGGTTTGGTT
TTCTTGCCGA CGCTGTATCT CGCGAATCGC CCGCTGGTAA GTCTGAAGGG CATTTGGACG
GCGAAGTTGG CGCTGAACGC GTGGCGCGTG GCGTGGCTCG CTGGACGCGT GCACGTGTGG
TTGCCTCGAC AAGAGATGTC GCCTCGCGAT GACAACGGCG AGAACGAGAG TGAGAGTGAT
TCTGACGACG ACGAAGAGGC GGCGCACTAC GAGCCGTTGT TGCCAGGGAA CGAGAGCGAA
GAAGACGTCG AGTCAGTCAC GCCGCAGACG AACGACGTGC AGTACGAATC GTCGCTCAAG
CCGTCGAAGA TTAAGGCGAA GGGTCTGTCG CCGATTCGCA CGCCCGAGCT CGCCATGGCG
CGGGCGTCTA GTTTGCGAGC GAGCGCCGGC GAATTCGCGC CGTCATCGAG TGTATTGTAG
 
Protein sequence
MCAALAMALA LVSGTASAIA CAATLTPSAR GAFRLTPEVA ALANEMFPWV LGATPFAMAF 
ESAMGTVCGI GRVETATRWS AGKAAADAAA TLAALGLGRG DAAKMRWIGV GTFAVSVAQA
GLGWWLVSTT TPRGWDEPLA PRATSARRLG AAETFGFLAN GASMVARSIL LQSSFFVAVV
VAARNLEPSG LAAHHIVVSL WMVCSYVVDG FATCATVIGS RLFGAGRKDE LVRLSHTLVA
WGVVTGFVFS AALVAGESAI PSVFTRDAKT KEALLGSGVW RVLVLAQPIN AAVFVYDGFI
YATHSFSFVR EVMATGVGLV FLPTLYLANR PLVSLKGIWT AKLALNAWRV AWLAGRVHVW
LPRQEMSPRD DNGENESESD SDDDEEAAHY EPLLPGNESE EDVESVTPQT NDVQYESSLK
PSKIKAKGLS PIRTPELAMA RASSLRASAG EFAPSSSVL