Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_12355 |
Symbol | RPSa |
ID | 5000849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009357 |
Strand | + |
Start bp | 530423 |
End bp | 531295 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | |
GC content | 63% |
IMG OID | 640416270 |
Product | Ribosomal protein Sa, component of cytosolic 80S ribosome and 40S small subunit |
Protein accession | XP_001416686 |
Protein GI | 145344326 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01012] ribosomal protein Sa(cytosolic)/S2(archaeal) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.30496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.113443 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCCTC AAATGTCCCA AAAAGAGGCC GACATCGCGA TGATGCTCGC CGCCGGGTGC CACCTCGGGA CGAAGAACGT GGACTTCCAA ATGGAGCGCT ACGTGTGGAA GCGACGGGCC GACGGGATCC ACATCATCAA CCTCGGACGG ACGTGGGATA AGCTCATGCT CGCCGCGCGC ATCATCGTTG CGTGCGAAAA CCCGCAGGAT GTGATCTGCC AAGCGGCGCG CCCGTACGGT CAACGCGCGG TGTTGAAGTT TGCGCAATAC ACCGGTGCGA AAGCCATCGC GGGTCGTCAC ACGCCGGGGA CGTACACGAA CCAAAAGGAC GCGATTTTCG CGGAACCGCG CGTGTTGATC GTCACCGATC CGCGCACGGA TGCGCAGCCT ATTTCTGAGA CCGCGTACGT CAACTTGCCG ACGATTGCGT TCTGCGACAC GGATTCTCCG TTGAAGAACG TCGACGTCGC CATTCCGGCG AACAACAAGG CGAAGCACTC GATCGGTTGC TTGTACTACT TGCTCGCGCG CATGGTTTTG CAAATGCGAG GCACGGTCTC CGCGGCGAAC CCGTGGGACG TGATGGTGGA TTTGTTCTTC TACCGCGATC CGGAGGAGCT CGAGGCCAAG GAAGAGGAAG CCGCCGCCGC GGCGGCGGCT CCGGCGGAAT CCGCGGGTTA CAACGCCGTT GCGGACGCCG CGTACGGCGC CGAGTCTTGG GACGAGCAAA AGCCGGCCGA GGCGTTCCCG ACGGGTGGTT TCGCTCCGGC TGCGGGTAAC TGGTCCGAGG CGCCCGCGCC CACGGGCTGG GATGCTCAGC AAGGTGGTGA CTTTGGCTCT GGCTTTGGCG CGATGCCGCC GCAAGGCTAC TAA
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Protein sequence | MAPQMSQKEA DIAMMLAAGC HLGTKNVDFQ MERYVWKRRA DGIHIINLGR TWDKLMLAAR IIVACENPQD VICQAARPYG QRAVLKFAQY TGAKAIAGRH TPGTYTNQKD AIFAEPRVLI VTDPRTDAQP ISETAYVNLP TIAFCDTDSP LKNVDVAIPA NNKAKHSIGC LYYLLARMVL QMRGTVSAAN PWDVMVDLFF YRDPEELEAK EEEAAAAAAA PAESAGYNAV ADAAYGAESW DEQKPAEAFP TGGFAPAAGN WSEAPAPTGW DAQQGGDFGS GFGAMPPQGY
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