| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_36252 |
|---|
| Symbol | |
|---|
| ID | 5000143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 96483 |
|---|
| End bp | 97445 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | |
|---|
| GC content | 65% |
|---|
| IMG OID | 640415564 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001416071 |
|---|
| Protein GI | 145341968 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.140786 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGAG CGTCCGCGCG CGTCGCGGCG TCGCGCGATG CCGACGGCGC GTCGCGCAAG
ACGTGCGTCG TGACGGGCGC GAACACCGGG ATCGGGCTCG CGACGGTGCG CGCGCTGCGG
GCGTCGAACG AGTACTCGAA GATTACGCTC GCGTGTCGAG ACGCGAGCAA GGCGCGACGC
GCGATCGACG CGCTCGCGCG CGACGGCGCG GCGTCGACGT GCGCGCTGGT GTTTCGAGAG
CTCGATCTGG CGAGCGTCGC CAGCGCGCGG GACTTCGCGG CGTCGTACCT GGACGACGAG
GGCGACGACG GGTTGGATTG CCTGGTGAAT AACGCGGGCG TCATGGCGGT GCCGAAACTC
GAGCGCACGC GCGATGGATT TGAATTGCAA GTCGGCGTGA ATCACTTGGG ACATCACGCG
CTCACGGCGG GGCTGATGCC GGCGCTGGCG AAGAGCGAGG ACGCGCGGGT GATTTGCGTG
TCGAGCGAGG CGCACAGAAT CGCGGGGAAA GGCTTGGCGC GGGAGGATTT GTTCGGGGAG
AAGAATTACA GCGCGTGGGG ACAGTACGGA CAGTCGAAGC TCGCGAACGT GTTGTTTGCG
TTCGAGCTCG CGCGAAGGTG CGAAAGGGCG GGACTCGGGA ACGTCACGGC GTCGGCGTTG
CACCCGGGCG CCGTCGACAG CGAGTTGGGT CGATATCTCC AACCGCCGGA TGAAGAAATC
AAGTGGTGGC AGACGAAGCT GTACGATTTC ATCAGATTGA ATTTTTTGAA GACGACGGAA
CAAGGCGCGG CGACGAGCGT GTTTTTGGCT CGAGAGATCG CGCGGGGAGA GGCGCGGGGG
AAGTACTACA GCGACTGCGC GGAGAAGACG CCGGCGAAGA ACTGCTTGGA CGTGGACGAC
GCTCGTTGGT TGTGGGATCG CTCCGCCGAG CTCACGGGCG TGGGTTTCGA TTCGCTGCTT
TGA
|
|---|
| Protein sequence | MPRASARVAA SRDADGASRK TCVVTGANTG IGLATVRALR ASNEYSKITL ACRDASKARR
AIDALARDGA ASTCALVFRE LDLASVASAR DFAASYLDDE GDDGLDCLVN NAGVMAVPKL
ERTRDGFELQ VGVNHLGHHA LTAGLMPALA KSEDARVICV SSEAHRIAGK GLAREDLFGE
KNYSAWGQYG QSKLANVLFA FELARRCERA GLGNVTASAL HPGAVDSELG RYLQPPDEEI
KWWQTKLYDF IRLNFLKTTE QGAATSVFLA REIARGEARG KYYSDCAEKT PAKNCLDVDD
ARWLWDRSAE LTGVGFDSLL
|
|---|
| |