| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_14352 |
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| Symbol | PPR1 |
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| ID | 5000287 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | - |
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| Start bp | 799469 |
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| End bp | 800803 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | 640415708 |
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| Product | pentatrichopeptide repeat (PPR) protein |
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| Protein accession | XP_001416498 |
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| Protein GI | 145343933 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00756] pentatricopeptide repeat domain (PPR motif) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.373458 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCGG ATGACTCTGA GGTGTGGCCG AACGCGCACG TGTGCACGAC GATGATGTCG
TTGGCGACGC GCGCGCGAGA CGCGGATAAG GCGTTGGCGA CGCTGGAGTG GATGAAAAGA
CGGAGCGCGG ACGCGCGAGA GGTGGCGCCG ACGACGCACA CGTATACGAC GTGCGTGCAA
GCGCTGGACG GCGCTGGACG GTGGGAGGAG GCGCTGGGGA TGCTGGGGGA GATGAAGCGC
GCGGGGACGG CGAGAAACGC GCACACGTAC AGCGCGTTGG TCAGAGCCGG GGCGAACGGC
GGGCGCGCGG GGGCGCGCGC GGTGGTGAAG TTGATTCCAG AGATGAAACG CGATGGCGTG
GAACCGGACT TGGCGATCGC GTCGGCGCTC ATCAGCGCTT TCGGGGTTTT GGGGAGCGAA
GACAACGCGA GGGCGATGTT GCGAGCCATC GAGTCGAGCG GGCGGGCGAC GGATAGCAAG
CTGTACGTGG ATTACATGAC GGCGATGTGT CGATGTGGGA ACTACGAAGA GGCGATAGAA
ACCTTCACGC GCGTGCCTCG CACGACTTTC ACGTGCACGG CGGTCATGAA GGCGTACGCT
GAGGCGATGG ATTGGAAGCT CGCCGAGGCT TTGTTCGAGG ACATGCGTCG CGACGGACCG
GCGCCGAACG ACCACACGTA TAGCGCCATG TTGCACGCGT ACGAAAAGAG TTTGCAGTGG
GAGCGCGCGG TGCGCTTGCT CAATCAGCTC ACGAGCGAAG GAAAGGCTAA GGAGATACAT
CACAACATTG TCCTCAGCGT TTTGGGCAAG TGCACGCAGT GGCAGCGCGC GGAGGTTTTA
TTTAGAGACA TGCGAGAGTT GTACAACATT CAGCCCTCTC GCGTGACGTA TAGCACGCTG
ATTTCGGCGT ACGGACGAAG TGGGAAAACT GATCTAGCGC GCAAGGTGTT CGAGCAAATG
CTCGCGCGGC GTATTCCGCC AGACGACTAC ACCTTTGTCG GCTTGATGCT CGGTCCCGCG
AGCGAGGGCA ACTTTCGAGA GTGCTCAAAA ATCGCGACCG AGATGAAGGA GTTGTACGAC
GTCGAGCACA CCGTGCACAC GTACAACACG CTCATCCAAG CCGCGGACAT CGCCGGTAAT
TACGACAAGG CGGTGGAGGT GTACGACGAA CTCTTGCAGC GCGGCATCGA GCCGAACAAC
ACGACGAGAG AACTCGTCGT CGCCGTGAGT AAGCGCGGGG CGAACTTTTA CGATCGCCAA
CAAAAGACCG CCGCCGTCGC ATCCTACGCC GCAGGTCTCG TCGGCGTCAT GGGCATGGCG
CTCGGTCGCT GGTAG
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| Protein sequence | MTADDSEVWP NAHVCTTMMS LATRARDADK ALATLEWMKR RSADAREVAP TTHTYTTCVQ
ALDGAGRWEE ALGMLGEMKR AGTARNAHTY SALVRAGANG GRAGARAVVK LIPEMKRDGV
EPDLAIASAL ISAFGVLGSE DNARAMLRAI ESSGRATDSK LYVDYMTAMC RCGNYEEAIE
TFTRVPRTTF TCTAVMKAYA EAMDWKLAEA LFEDMRRDGP APNDHTYSAM LHAYEKSLQW
ERAVRLLNQL TSEGKAKEIH HNIVLSVLGK CTQWQRAEVL FRDMRELYNI QPSRVTYSTL
ISAYGRSGKT DLARKVFEQM LARRIPPDDY TFVGLMLGPA SEGNFRECSK IATEMKELYD
VEHTVHTYNT LIQAADIAGN YDKAVEVYDE LLQRGIEPNN TTRELVVAVS KRGANFYDRQ
QKTAAVASYA AGLVGVMGMA LGRW
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