| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119781 |
|---|
| Symbol | Dhx57 |
|---|
| ID | 5000230 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 889717 |
|---|
| End bp | 894354 |
|---|
| Gene Length | 4638 bp |
|---|
| Protein Length | 1545 aa |
|---|
| Translation table | |
|---|
| GC content | 56% |
|---|
| IMG OID | 640415651 |
|---|
| Product | Dhx57-like DEXH-box helicase, probable |
|---|
| Protein accession | XP_001416284 |
|---|
| Protein GI | 145343060 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1643] HrpA-like helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 58 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCCCA GTAACGCCCA GAAGAAAGCC TTGGCGAAAG CCAAGCGCGG CATCGTGTCA
TCCGGAGCGA TGAGCTCTAA GAGCGGCTTC GACCCAGCGC AAGTAAAACC AAAAGAGCTC
CCGTGTCCGC ACTGCGATCG GATATTCAAG CAACAGGACA GACTGAAACA GCACATCGCG
AAGCAGCACG CCGATGTCGT GGCCGAACAG AGCGGTTCGG AGTCCGTGGT GGGCGATGGG
AAGACAACAA AGGTGAGCGC GAAGGCGGCG CTCATCATCG CGGAGCGCGA AAAATTCAAG
GAGGAAGCGG CGAAGGAACG CGCCGCGAAT CCCGACTCCA AGGTCGCCAC GCCGTTTGCA
AGAATGAGCT GTAAGCTCCC GAGCACAATC TTACGCGAGT TTGTGCAAAA ACAGAAGGAG
TATAAGGCTC CCGTGTTTCG TGCGAAGGAA GAAAAGCTCG ACGGCGAATC GACGTGGACG
TGCAAACTCG TTTTAAGAGA CAAGCACAAG CCCGACAAGG ACAAGGTGTT CTTCTGGAAC
GAAAAGTGCG AGACGAAATT AGAGGCTGAG CATAGAGTCG CGGTGGTGGC GCTGGCGAAA
ATTGCCAACA CGCTACCTTT GCAGCGCCTG TTGCCGAATC AATACAAGGA GACCTTCACA
CAATGCGAAG AGATGGAAAA AAAGAAAGTG GAGGATGCGA AGAAGCGAGC GGCGAGAGAG
GAGCAACGCA TCGCCCGAAT GAAACGACTT GCAAAGCAGG AGATGGCACA AGTCTTGACT
ATGAGTGAGG AAAAGCGAGC ACTCGTGGAA TCCATACTCA AAGAAGATTA CGAGTCCGCG
TCTGACGAAG ACGAAGACGA AGACGAAGAC ATGCAGCTCG AAGAAGACGT TGAGATAGCT
GGGGTGAACG CGTTGTGTGA CAAATTGGAA AGCTTAGGGT TCGGGCGCGA AGACGCACTG
GCGGCATCGA AAGCGACGAA ATCGAAAGAC ATCGCCGCGC TGGATGGCGC GATTAGCTGG
TTGTGCGTTC ACGTGCCCGA CTACAGGCTA CCCACGGTGT ACGCTCCTAA ATCGCTCAAC
GAGGGTGGAG TGGTGTTACT CAGTAAAACC AAACCCGCTC AACCCGTGGA GATCGATTCG
AGGCCGTCGA GCGAGGATGC GGCCTGGCTC TGGGAGCGCG GTTACGCGGC GACGGCGTGC
GACGACGCAT TGCGCGCGCA CTCCAGTCGA GAGGAAGCGC ACGCTCACTT ATTCGGCCAA
GTTCTCGCTG GAATTTCGAA ATCGTACGAG GCGTGGCCGA CCCACGATTC TGATGCAAAC
GACGAAGACT GGGAAGACGA ATTGACGGCG ATAGAAGCCA TTTGCGGCGA AGACACGGTT
GAGCGCTTAC CCGCCGGCGT TCGCGTCGCA ATCGATACAT CCGCCGGCGT GAAGGGATAT
CTCGAAGTGT ACCGCCTCAA AAACGGTGGC TATCCAGCGA TTGAACCGCC TCTGATTGCA
TTTCATGCGC ACGGTGAACT TCGAGCTGAG TTTTTCGGCG CGACTCGAGC GCTTGCGAAG
CTCGCCATTG ATGGATGCGG CGCGCCTTGC GTGTACACTA TGATAGAGGC TGCCGGAAGC
TTGGTGGAGA AAGTCGCGAA AACACATTCG TCGTTGCAAA CTATCAGCGC TGCGGATGCA
TCGAATCGGC CACCCGTACC GAAGCCACGA GTGCCGAACG TCGCCCCAAA TCGCGCCGCG
ACGCCATCTC TGGCGGCGGC GGAGTCGAAA CGACAGAACA CAAAACGCCC GCATCGAGGG
CTTTCCGAGA GCGATATCGT GTCTGAGAAT CGAAGGTTGC TCGATGCTTT CAACGCATAC
CTTGAGTCGG CAAAATCCGG CAAAGGTGAA GCGTATGCGA TGATGAACGT GCGTTTGAAT
TTGCCGGCGA GCGGAAGTCG AGAAGAAGTG ACTCGAGCCG TGAACAAATC ATCTGTGGTT
GTCCTGAGCG GCGAGACTGG TTGCGGCAAG TCAACGCAAG TGCCTCAGTT CATACTTGAA
TCTGAAATCG CCGCGGGCCG TGGCGGTGAG ACTAACATCA TCGTCACTCA GCCACGTCGA
ATTTCCGCCA TCGGCCTCGC CGAACGAGTC GCGGCGGAGC GCTGTGAGAG GTGCGGTGAC
GTCGTCGGCT ACTCCGTTCG ACTCGAATCC AAGCAATCGT CGAAAACGCG ACTTCTTTTC
TGCACGACTG GTGTTCTGCT TAGAAGATTG CTTTCCGATC CCTTGCTCGC GAACACGACG
CACGTTATTC TTGACGAAGT TCACGAACGT TCAGTCGACT CCGACTTGTT GCTGCTGCTC
CTGCGAAGAG TCATAGCAAA GAACCCGAAA ATACGAATCG TACTTATGTC CGCCACCGCG
GATGCGGACC TGTTCGATGA CTATTTCAAG CATCCATCCG CAATCGCCGC GGTAAGCGGC
GTGTCGACGA CGCAAGTCCA CATAGCCGGC TTCACGCATC CCGTTCGCGA ATACTTCTTA
GAAGACGTAT TCGAAATGAC TGGTCATACG GTCGGCAAGG GTGGACCATA CGCGAAGCGC
AAGCAAATCA AACGCGTGAA GTCAAACGCA GAAGTTGAGA CGCTTTTAGC CGAAAAAGCT
GCGCAACGTA AGGCTGAGCG CGCCGCTCTC GGGCTGGACA AAGGTGGCTC GGACGACGAC
GACGACGACG ACGACGACGA CGACGACGAC GGCATCGACG ACGTTCCTGA CGATTGGGAT
TTAGCTGACG ATGAACGCGC GTATGAGGTA AAACGTGCGC CAGACGTTGA AGACCAATTC
GGCGAGACAC CTGCGATGAC ACCCACGCAA ATCGAGGAGG AACGTCGACG AGCGGACTTG
CTGTCTGAGG CGTCGAGAGC GTTGAATGGG TACTCTGTCC CGACTCAAAG AAGTATTCAA
AACGTCGACG AAACCATCAT CAACTATGAC GCCATCGAGC AGCTCGTTGG TGCAATTATT
CAAACAGAGC TTGAAAACGG TCCGAGTGCG CTAGTTCCAC CGCCCATTGC GGGAACAAAC
CCGAAAGATG TCGGCCTCGG CGCGATCCTC ATTTTCATGC CGGGTCAATT TGAAATTTTG
CGGTTGATTC GCAAACTCGA GCAATCACGC CTTTTAGAGG CGGATGACGT CGGTGCGCTC
CGCATTCTAC CGCTTTACGG CTCGCTGTCC TCCAAAGATC AGAAGCGTAT ATTCGAACGT
CCGCCAGATG GAGTGCGGAA AATCGTCGTG GCGACCAACA TTGCGGAGAC ATCCGTGACG
ATTGACGACG TGCGGTATGT CATCGATACG GGACGTGCTA AAGAGATGCA GTACGATACG
TTGCGCGGGT TATCAGTGCT TGCAGACACT TGGGTCTCGC AGGCGGCGGC GAAGCAGCGG
CGAGGTCGTT CTGGTCGCAC GGCGCCGGGC GCGCGGTTCG CCATGTTTTC GCGAGCGCAG
TTCGCGAACA TGTTGCCTCA GCAACCGCCC GAAATGCTTC GAACGCCGCT TCAGCAGTTG
TGTTTGTCCA TCAAGGCTAT GAGCGAACAA CCAGTCGCGC AGACGCTCGG CGCCGCTTTG
ACACCGCCTG ATACTCGCGC AATTCACGCC GCACTTGACG AGCTTTGCGC GTTGCGAGCA
TTCGACGCCG ATGAACGTTT GACGCCGCTC GGACGTCACT TGGCGCAGAT GCCTGTCGAC
GCTCGTATAG GTAAAATGCT TTTGTTTGGC GCGTTGTTGG GCTGTCTCGA TCCTATTCTC
ACGATCGCCG GAGCGATGAG CGGTAGACCG TTGTTCTTCT CGCCGAAGGA TAATCGCGAC
GCTGCGGACA AGGCGAAGCG AAGTCTTTCC GCGACAAAAT CGGACCACCT GACCATGGTT
GCGGCGTATA AGGGATGGGC AAAGGCAAAG GCGCGAGGAA AGCCGTTCGA ACGACGGTAT
TGCGAGGAAT ACTTTTTGAG TTCGCAAGCG CTTGAGGCGG TACATGCGAG TCGGCTTGAC
TACGCGACGA TTCTCGCCGA TTTAGGTTTC GTGAGGCGCG AGTACATCAA CAACATGCGC
CGTTTCGGAA CGGGAGGAAC GGAGGCTGAT TCAAACAGCG AAACTGCCCG CGTGATTAAA
GGCGCGCTCG TCGCTGGCTT CTACCCTCAT GTCGTTCGAG TGAAGCATCC AGAGACCAAG
TACGCGCAGA CGACATCCGG GGCCGTGGCG AAGGCTGCGA ACAGTCGCGA GCTGAAATAC
TACTCGAAGG ACCTTGGGCG CGTGTTCTTA CACCCGGCAT CGGTAAACTT TCACTGTGGG
AAGTTCGAGA GCCGATGGAT CGTATACAGC GAACGCGTCG AGACGGCAAA AGTGTACATT
CGCGACAACA CCATGGTCGG TTCGTATTCG CTTCTACTTT TTGGCGGCGA TATCGCTGTC
CACCACGAGC AAGGTCTCGT TCGCGTCGAC GATTGGGCGA CGTTCGCAGC GCCCGCAAAA
ATCGGCGTTC TCGTGAAAGC ACTGCGCGCC AAGGTTGACG AACTGCTTCT CGCTCGCATC
AACCATCCGT CGGCGACGCT CGCGTCGACG CCCGTGGTGC GAGCGTTATT ATCCCTTCTG
GAGTCAGAAG GGCATTGA
|
|---|
| Protein sequence | MGPSNAQKKA LAKAKRGIVS SGAMSSKSGF DPAQVKPKEL PCPHCDRIFK QQDRLKQHIA
KQHADVVAEQ SGSESVVGDG KTTKVSAKAA LIIAEREKFK EEAAKERAAN PDSKVATPFA
RMSCKLPSTI LREFVQKQKE YKAPVFRAKE EKLDGESTWT CKLVLRDKHK PDKDKVFFWN
EKCETKLEAE HRVAVVALAK IANTLPLQRL LPNQYKETFT QCEEMEKKKV EDAKKRAARE
EQRIARMKRL AKQEMAQVLT MSEEKRALVE SILKEDYESA SDEDEDEDED MQLEEDVEIA
GVNALCDKLE SLGFGREDAL AASKATKSKD IAALDGAISW LCVHVPDYRL PTVYAPKSLN
EGGVVLLSKT KPAQPVEIDS RPSSEDAAWL WERGYAATAC DDALRAHSSR EEAHAHLFGQ
VLAGISKSYE AWPTHDSDAN DEDWEDELTA IEAICGEDTV ERLPAGVRVA IDTSAGVKGY
LEVYRLKNGG YPAIEPPLIA FHAHGELRAE FFGATRALAK LAIDGCGAPC VYTMIEAAGS
LVEKVAKTHS SLQTISAADA SNRPPVPKPR VPNVAPNRAA TPSLAAAESK RQNTKRPHRG
LSESDIVSEN RRLLDAFNAY LESAKSGKGE AYAMMNVRLN LPASGSREEV TRAVNKSSVV
VLSGETGCGK STQVPQFILE SEIAAGRGGE TNIIVTQPRR ISAIGLAERV AAERCERCGD
VVGYSVRLES KQSSKTRLLF CTTGVLLRRL LSDPLLANTT HVILDEVHER SVDSDLLLLL
LRRVIAKNPK IRIVLMSATA DADLFDDYFK HPSAIAAVSG VSTTQVHIAG FTHPVREYFL
EDVFEMTGHT VGKGGPYAKR KQIKRVKSNA EVETLLAEKA AQRKAERAAL GLDKGGSDDD
DDDDDDDDDD GIDDVPDDWD LADDERAYEV KRAPDVEDQF GETPAMTPTQ IEEERRRADL
LSEASRALNG YSVPTQRSIQ NVDETIINYD AIEQLVGAII QTELENGPSA LVPPPIAGTN
PKDVGLGAIL IFMPGQFEIL RLIRKLEQSR LLEADDVGAL RILPLYGSLS SKDQKRIFER
PPDGVRKIVV ATNIAETSVT IDDVRYVIDT GRAKEMQYDT LRGLSVLADT WVSQAAAKQR
RGRSGRTAPG ARFAMFSRAQ FANMLPQQPP EMLRTPLQQL CLSIKAMSEQ PVAQTLGAAL
TPPDTRAIHA ALDELCALRA FDADERLTPL GRHLAQMPVD ARIGKMLLFG ALLGCLDPIL
TIAGAMSGRP LFFSPKDNRD AADKAKRSLS ATKSDHLTMV AAYKGWAKAK ARGKPFERRY
CEEYFLSSQA LEAVHASRLD YATILADLGF VRREYINNMR RFGTGGTEAD SNSETARVIK
GALVAGFYPH VVRVKHPETK YAQTTSGAVA KAANSRELKY YSKDLGRVFL HPASVNFHCG
KFESRWIVYS ERVETAKVYI RDNTMVGSYS LLLFGGDIAV HHEQGLVRVD DWATFAAPAK
IGVLVKALRA KVDELLLARI NHPSATLAST PVVRALLSLL ESEGH
|
|---|
| |