| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119572 |
|---|
| Symbol | Ddx49 |
|---|
| ID | 5000121 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 588475 |
|---|
| End bp | 589728 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 640415542 |
|---|
| Product | Ddx49-related DEAD box helicase superfamily II protein |
|---|
| Protein accession | XP_001416184 |
|---|
| Protein GI | 145342427 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.708695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCTT TCGACAAGCT TGGTTTAAGC GGCGTACTGC TACGTAATAT TCGGCAGCTA
GGTTTTACAG AGCCTAGTTC TGTGCAAAAG TCTTGCATCC CGCCGATCCT TCAGGGAAGG
GATGTCATCG GCATTGCCAA CACAGGAAGT GGAAAAACAG CTGCCTTTGC CCTGCCCGTT
GTGCACGTAT TGAGTGTAGA CCCACATGGC GTCTTTGCGC TCTGCCTTAG CCCTACGCGG
GAACTGGCCT ATCAGATAGC TGAACAGTTT GCAGTTTTCA GCGTCGGAAT GTCTCTCAGG
TGTGAAGTGG TAATTGGTGG TGAGGACCTA CTTCGACAGG CCAGCTCACT ATCGAAACGT
CCGCATATTG TTGTCGCAAC GCCTGGACGT TTACTAGAGC ACTTCATGCA CTCCTCTGAT
ACCATAGAAT GCTTTCAGAG ACTCAAGTTC TTGATTTTAG ACGAGGCGGA TAGACTTCTA
GATTCCTCCT TTGAGGCTGA GCTCCGATAT CTGTTGACAA ATTTGCCACA GAAGCGCCAG
ACTCTGATGT TTTCTGCCAC CATAACACCA AGCGTTATAG CACTCAAGCC ACTCCTCGGT
CAACGTGCTT TCTACTATGA AGAAAAAGGT GAATTAACGA CGCCCACCGG GTGCGCGCAA
TACTACTGTT TCATGCCCGA AAAAGTCAAG GATACGTACT TGGTTCACGT GTTGAGAGAA
CTTGTGTCAA GCAAGTCCAC ACGCGCCATG ATATTTTGCC CTACAGTTCA GAAGTGTGAG
ATGGTATCGC ATATGCTTCA TAATCTCGGT ATAGCTGCAT GTTCTCTACA TGCAGCGAAG
AAACAGAGAG ATCGACACTC CACATTGAAC GCTTTTAAGA GTACAATGGT GAAGATTTTA
GTCGCGACAG ATGTTGCGGC GCGAGGACTT GACTTGCCTG ACGTTGAATT GGTGGTCAAC
TACGATATAC CCTCAGATCC TCGTCAGTAC ATTCACCGAA TCGGTCGAAC TGCTCGATTT
CACGCGACTG GTCAAGCTAT ATCGCTCGTC ACGCAGTATG ATGTAGGAAA AATCAAGAAA
ATAGAAAAAC ACCTTGGGCA CGAACTCGAA GAATTTCATG TGCAAGAAGC AGATGTTAAT
AAGTTGGTGG GAGAAGTTTT TGCTTCTAGA AAGATGGCCA AATTACACAT GGCTTCCCCA
GGCGGATTCG ATGAGCAGCT CAGTGCAAAG AAGAAGCGAC AATCGGCTAA GTAA
|
|---|
| Protein sequence | MTSFDKLGLS GVLLRNIRQL GFTEPSSVQK SCIPPILQGR DVIGIANTGS GKTAAFALPV
VHVLSVDPHG VFALCLSPTR ELAYQIAEQF AVFSVGMSLR CEVVIGGEDL LRQASSLSKR
PHIVVATPGR LLEHFMHSSD TIECFQRLKF LILDEADRLL DSSFEAELRY LLTNLPQKRQ
TLMFSATITP SVIALKPLLG QRAFYYEEKG ELTTPTGCAQ YYCFMPEKVK DTYLVHVLRE
LVSSKSTRAM IFCPTVQKCE MVSHMLHNLG IAACSLHAAK KQRDRHSTLN AFKSTMVKIL
VATDVAARGL DLPDVELVVN YDIPSDPRQY IHRIGRTARF HATGQAISLV TQYDVGKIKK
IEKHLGHELE EFHVQEADVN KLVGEVFASR KMAKLHMASP GGFDEQLSAK KKRQSAK
|
|---|
| |