Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | OSTLU_119571 |
Symbol | Wdr50 |
ID | 5000349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ostreococcus lucimarinus CCE9901 |
Kingdom | Eukaryota |
Replicon accession | NC_009356 |
Strand | - |
Start bp | 586721 |
End bp | 587956 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | |
GC content | 48% |
IMG OID | 640415770 |
Product | WD-repeat protein |
Protein accession | XP_001416430 |
Protein GI | 145343655 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAGGCT CACGTGGCCG TGCCTGGATA GACGACCATG GTGACGGCGG TTTCTGCGGA AATTTTGCGA ACAAGCGACG GGTGGAGGCA GTTGAGTTTG CGGGTTCTGA ATTGGCTCTT TCTCAGCCAG ACGAAGAATC TATTTCCTTC ATCGGGTCGA AAGTAGTCAA GCGTTGGTCC GATGGTACCC ATACCAGCAC CGGTCGTGCT TTCCCAGAAG TTGGAAACTC CGCAGTTCGT GTAGGGCTGG AAGCTCGGCG CAACCTGAAT CTTCTTGATT TTACGAGGGT GAAAGATTTT GATTTTGACG GCCCCCCTGA GAGTGCAGCT ATTTGTGTGC ATTTTCACCA CAAACGTGAG TTGGCCTTGA GTGCTAGTGC CGACTCTCGG GTGAATATAT TTAGGGTGGA CGGTAAAAAC AACAAGCTGT TTCAGACACT GTCGATAGAA AATGTATCAA TTAAGAACGT AGAATTCAGC AGGAGTAGCG ATTACACTAT TATATGCGGC AAAGGGAACT TATTATTGGG CCATCTTGAG AGAAACACCG TTGAGAGGGT CCACATGCGT AGAGAGACGC TCGTCCGCGG TACCTTTGCT CAAGCTCCAG GCACAGACTT GTTAGGTATT CCAGGATCAT CCGAAGTGAA TATAATTTCA CAAACGAGCC GCACGTGTGT TATGAAACTC AATACTACTG GTACGTCGGT TCGTGCATGT GTATTTTCAC ACGCCGGGAT GGAGATAATC GGCGTCACAG ATGATGGATT GCTTTATTGT TGGGATGTTC GGATGCAGCG TTGTCTGAAA AAAGCAGCTG GTTTTGATGA CACAAAATGT ATATGTTTGA CACCTGACGG TGAGAAAATC ATCACGGGGC AAGGCAATGG CATAGTCAGC GTCCATAGAT TCGCAGATGT GGACTGGAGT GATCCATATA AGAGAAGAAC GCAGAGTCCA GCAAAGCGCA TATCAAGTCT TTCGACATCG GTCACATCAC TAAGTTCAGA TCCTCATGGT GATATCATCA TCATGTCGTC ATCATTCAAG AAGAACGCTT TACGAGCCTT CCACGTCCCT ACGTTATCGA TGGTCAAAGC TTGGCCAACT AGCTCAACCC CTTTACACTA CGTCTCGTCG ACAGCTTTCA ACAACGATGG CACACTTCTG GCCGTCGCGA ATGCGAGGGG TCGCATACTC ACGTATCGAG TTTGCTCTCG GCAAACAAAT GCATGA
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Protein sequence | MGGSRGRAWI DDHGDGGFCG NFANKRRVEA VEFAGSELAL SQPDEESISF IGSKVVKRWS DGTHTSTGRA FPEVGNSAVR VGLEARRNLN LLDFTRVKDF DFDGPPESAA ICVHFHHKRE LALSASADSR VNIFRVDGKN NKLFQTLSIE NVSIKNVEFS RSSDYTIICG KGNLLLGHLE RNTVERVHMR RETLVRGTFA QAPGTDLLGI PGSSEVNIIS QTSRTCVMKL NTTGTSVRAC VFSHAGMEII GVTDDGLLYC WDVRMQRCLK KAAGFDDTKC ICLTPDGEKI ITGQGNGIVS VHRFADVDWS DPYKRRTQSP AKRISSLSTS VTSLSSDPHG DIIIMSSSFK KNALRAFHVP TLSMVKAWPT SSTPLHYVSS TAFNNDGTLL AVANARGRIL TYRVCSRQTN A
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