| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119553 |
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| Symbol | Swr1 |
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| ID | 5000432 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Ostreococcus lucimarinus CCE9901 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_009356 |
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| Strand | + |
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| Start bp | 539221 |
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| End bp | 542588 |
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| Gene Length | 3368 bp |
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| Protein Length | 1053 aa |
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| Translation table | |
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| GC content | 45% |
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| IMG OID | 640415853 |
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| Product | Swr1-Pie_related helicase |
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| Protein accession | XP_001416174 |
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| Protein GI | 145342259 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00241522 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCCGG GCGACGAGGA GTTCGTGCCG CTGGGTGAAG TCGAGGATGA CTTGGTCACT
TTCGACGAGG AGGTGAGCTT TCGCTGTACA TCAAACAATT CCAGCAATGA CGGTCGTTCA
CTAACAGGCG GCAATGGTGA CTCAAGATGA GCAGAAAGCA GAGCTATTGG AATTAAAAGC
GGAGGGAGAA CTTCCACTAG ATCAGCTACT TCTTCGATAC GGAATTCAGC ACGCGATTGA
TAAAGGGGGC AACACGAAGC AAGAGTCGAG GGAAACAGGG GCAGCTCGAC AACCAACAGT
TTCCTTGCGC TCCTTAAAAG TGGAGCCCCA GGCAGTAGCT GACAATACTG TTGCGTACAA
CGAAGCGGTA TCCATCGCAG CTGAAATCAC CAGTGAAGAG AACATAATAC GTAGCTTCGA
AAAGTTGTTG CACAAGACGG AATCGACAAA ACCACTCCCA CATTTTCCAG AGCCAACGAA
AACGAAAAGT CACTGGCTTC ACACGTTGGA GGAAATGTCT TGGCTTTCAG GCGACTTTTC
GCGAGAGCGA AAATGGAGGT AAGGAATTCT AAAACCCGAC AATCTCACGT TTTAAATAAA
TAATTGACGC TAGGAAACGT TCGGCTTTGA AGGTGGCAAC AACACTTTCA AAAATTCGTA
AACGAGAAGT TCAAACCGAC ATGAAAAAGG CACACGAAGA ATTAGTACTA GCCCGTAAGA
CGGCAAAAGC AATCGCAGGG TCTATTCTCA CATTTTGGAA CAAGGCTAAC AAGGTATGCT
TCGAAATTTG CCGCTTTTTT ATCAACTCAG ATGGCGTTTA GGTATTGTCG TTGCAACGCC
AAGCAGCCGA CGCACAAGCG CAGAAGATGA AGCTCGACGC ACAGTTAGGT ATAAAACTTA
CACCTGTCAG AAATTTCACG CCTTACATAT CAGTAGATGA GCTCGTCAAG GTCACAGAAG
CCTACTCAGC GCGACTCGCC GCAAAGTTGA ATACAAATCA GCCTTTTCCT TGCTACGGTG
GAAACGTACG CACAGAGCAA AAACATAACA TTGAACCTTC TATTGGCAGT GGATCAAACC
TTTCTGTTCA GACTAGGAGT AACTGTTCTT CTACTGATAT ACTAGACTTT TCATTGCTCA
AACATAGTTT ACGTGACTAT CAGCTGGAGG GTGTCAGGTG GTTAAGAAAT TGCTATATCA
ATAATTTGAA CGTACTATTG GCAGATGAAA TGGGCTTGGG TAAAACTATT CAGACTATCG
CTCTTCTTTC TATGCTCGCG ACCGAGTTTG GAAACTGGGG ACCACACTTG ATTGTTGTAC
CCACATCTGT TATGCTCAAC TGGGAGGTTG AATTTAAGAA GTGGTGCCCA GCTTTGAAAG
TGTTCACCTA TTTTGGTTCT GTTCGCGAGA GGCGTTTGAA GCGGCATGGG TGGAGTAAGC
CGAATAGTTT CCACGTTTGC ATAACTTCTT ATCGCATTGT TACTCAGGAT CAGAGTATCT
TTCGACGTAA AAATTGGGAG TATCTAATAC TGGATGAGGC CCACATGATA AAGAATTGGC
GATCACAGCG TTGGCAAGTA CTCTTAAATT TTAGTACGAA GCGTAGGCTC TTGATCACTG
GCACTCCACT GCAGAATGAA TTGATGGAAC TGTGGGCGCT GATGCACTTT CTGATGCCAG
ACTTATTTGG ATCTCACTCT GAATTCAAAG ACTGGTTTGC GAATCCAATG AGTGCTATGG
TGGACGGCAC TCAGTCGGTA AATGAGTTGA TAGTTACCCG TCTACATTCT ATCCTCCGAC
CATTTATTTT GCGTAGGTTG AAAATGGACG TCGAAAAGAC GCTTCCAGAG AAACACGAAC
ACATCGTGAA ATGCGTCCTA TCCCGCCGGC AAAGGCGCCT GTACGAGGAG TACATATCCT
CTAACAACAC ACTCAGGACA CTAGCAAGCG GGAACGTCAT GGGTGTGATG AACTGTCTCA
TGCAGCTTAG AAAGGTTTGC AATCACCCAG ACTTGTTCGC CGGAAGGCAG ATATGTAGTC
CATTTGATGT GAAACATGTA TGTTGGCTAT CATATTTCGT GTTGCTCACG AGTGCGCGCC
TCAAATCGGC AAGATGCGGG ATTAATCTTC GACTCAGTGG ACCAAATGTG GCCGGCAATG
GAAAAGAATT GAACCGCTAT AGATCGCGAG ATCGAATTGA AGAACAGCAT AATGTCGGCA
CTTCTTTCAT GGAAAATATC GTGCTTCCAT TATCAGAAGT ACGAGCCGAA CGCACAACAT
TTCAAGCGAC AAGTCTATCA TTTTATGCCG CTCAAGCTCT ACTGTCCAAT ATCACGGCAC
ATACACGTTA CGCAACAACT ATATTCCCCA AAACAAAACA TCTATCACAG TTCGGTAGAA
TTGGCCAATT AGCTTGGTTT GAAGACTCAG CTGTCATAGA TAATTTGATT CGCTTCACAT
TTATTATCCC AAATGTGAGA TCAACAACGC CATCCGTATG GTCTCTCAAT GAATCAACAC
ACTCTAGTGG TGGTCGATTT GAAGAATGCG CTCTCGGTCT TATGGCCCCA ATCAGGAAAT
TCGTCGCCAG GCAAAGTATG TTCGTTCCAG ATAAACGCTT AGTACAGTTC GATTGCGGTA
AATTGCAGAT TTTGGCAACA CTACTCCGAA AGCTGAAACA GGACGGTCAC AAAGCATTGA
TATTCACCCA AATGACAAAA ATGCTGGATG TATTAGAAGC ATTTCTGAAC TTGCACGGCT
ACACATATTG TCGCCTTGAT GGTAGCACCG GTGCTGAGCA GCGCCAGTTA CTCATGCAAC
GGTTCAATAG CGATAAAAGA CTTTTTGTCT TTATTTTGTC AACACGTTCC GGCGGATTTG
GTATCAACTT AACAGGAGCA GACACCGTTA TTTTTTATGA TTCTGATTGG AATCCGGCGA
TGGACCAGCA AGCTCAAGAT CGCTGCCATC GTATCGGTCA GACGCGGGAA GTGCATATTT
ACCGTTTGAT AAGCGAAGGG ACAATTGAAG AGAGTATACT TCAGAAAGCG GTCCAGAAAC
GTGAATTAGA CAACATGGCG ATCCAATTGG GCAATTTCAA TACGACGTCA TTCAGTACAC
AGCAGGCACA TTCGCAACAA CATGCTGTCT CTGGTGAGAC TTTGGAAAAT GAGGCTATGT
TTGAGCAAAA AAGATTTGAA CGAATACATG ATGTTGCAGC GCTAGGGGAG AGCGCTGCCG
CCCACACGAC TGAAAATACT GTAGACGAAC ACTACAAATC ACAACTACAG AGTGAAGATA
CGTTTGACCT GCAAGCACTC TTACCAGTTG AAAAGTATGC GCTCCTCAAG TGCGCTGCAC
AAAGTTGA
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| Protein sequence | MSPGDEEFVP LGEVEDDLVT FDEEAAMVTQ DEQKAELLEL KAEGELPLDQ LLLRYGIQHA
IDKGGNTKQE SRETGAARQP TVSLRSLKVE PQAVADNTVA YNEAVSIAAE ITSEENIIRS
FEKLLHKTES TKPLPHFPEP TKTKSHWLHT LEEMSWLSGD FSRERKWRKR SALKVATTLS
KIRKREVQTD MKKAHEELVL ARKTAKAIAG SILTFWNKAN KVLSLQRQAA DAQAQKMKLD
AQLDELVKVT EAYSARLAAK LNTNQPFPCY GGNVRTEQKH NIEPSIGSGS NLSVQTRSNC
SSTDILDFSL LKHSLRDYQL EGVRWLRNCY INNLNVLLAD EMGLGKTIQT IALLSMLATE
FGNWGPHLIV VPTSVMLNWE VEFKKWCPAL KVFTYFGSVR ERRLKRHGWS KPNSFHVCIT
SYRIVTQDQS IFRRKNWEYL ILDEAHMIKN WRSQRWQVLL NFSTKRRLLI TGTPLQNELM
ELWALMHFLM PDLFGSHSEF KDWFANPMSA MVDGTQSVNE LIVTRLHSIL RPFILRRLKM
DVEKTLPEKH EHIVKCVLSR RQRRLYEEYI SSNNTLRTLA SGNVMGVMNC LMQLRKVCNH
PDLFAGRQIC SPFDVKHVCW LSYFVLLTSA RLKSARCGIN LRLSGPNVAG NGKELNRYRS
RDRIEEQHNV GTSFMENIVL PLSEVRAERT TFQATSLSFY AAQALLSNIT AHTRYATTIF
PKTKHLSQFG RIGQLAWFED SAVIDNLIRF TFIIPNVRST TPSVWSLNES THSSGGRFEE
CALGLMAPIR KFVARQSMFV PDKRLVQFDC GKLQILATLL RKLKQDGHKA LIFTQMTKML
DVLEAFLNLH GYTYCRLDGS TGAEQRQLLM QRFNSDKRLF VFILSTRSGG FGINLTGADT
VIFYDSDWNP AMDQQAQDRC HRIGQTREVH IYRLISEGTI EESILQKAVQ KRELDNMAIQ
LGNFNTTSFS TQQAHSQQHA VSGETLENEA MFEQKRFERI HDVAALGESA AAHTTENTVD
EHYKSQLQSE DTFDLQALLP VEKYALLKCA AQS
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