Gene OSTLU_119493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOSTLU_119493 
SymbolRbx1 
ID5000481 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameOstreococcus lucimarinus CCE9901 
KingdomEukaryota 
Replicon accessionNC_009356 
Strand- 
Start bp437892 
End bp438315 
Gene Length424 bp 
Protein Length110 aa 
Translation table 
GC content42% 
IMG OID640415902 
ProductRING-box protein 1 
Protein accessionXP_001416387 
Protein GI145343560 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG5194] Component of SCF ubiquitin ligase and anaphase-promoting complex 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0313077 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCATA CAAATGTGGA CCAGACATTT CAGTTGAAAA AGGTAAGTGC TGTTAAGATC 
GGGAAAGAAG TCGCTCACAA GAAAGTAGTG GTCAGCTGTT GCTGTTTGGT CTTGGTCCAT 
CTGTACAGAT ACATGTGCTA TCTGTAGGAA CAGCCTACAT GAAGCTAGTA TAGAATATCA 
AGCAAACCCT TCTGCTTCAT CAGACGAAGG TCTGAGCATT GCTTGGGGCA ACTGTGGACA 
TGTTTTCCAT CTGGACTGTA TTTCGAAATG GCTTCGGACG CGTAGCAACT GTCCACTTTG 
TGTACGTGAG CTTTATTTTC TTATCACAAC GCTTACATTT TCTCAGAACA AGGAATGGGA 
GTTTTCGAAG ATGGAAAAAG TGAGTTACAA TTTTGTATCA CTCTCAAAGC TTTCGTGCTC 
ATAA
 
Protein sequence
MSHTNVDQTF QLKKWSAVAV WSWSICTDTC AICRNSLHEA SIEYQANPSA SSDEGLSIAW 
GNCGHVFHLD CISKWLRTRS NCPLCNKEWE FSKMEKVSYN FVSLSKLSCS