| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_119483 |
|---|
| Symbol | Hel1 |
|---|
| ID | 5000193 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009356 |
|---|
| Strand | + |
|---|
| Start bp | 420670 |
|---|
| End bp | 422010 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | |
|---|
| GC content | 47% |
|---|
| IMG OID | 640415614 |
|---|
| Product | DEAD-box helicase, probable |
|---|
| Protein accession | XP_001416141 |
|---|
| Protein GI | 145342120 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.112592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCTT TCGTGAGCGG CGAGAAGCTA AGGAAACGAA ATGGGCACGA CATGAACGGC
GAATGTCCAC GACAAATTAC ACCAGTTTCA CCTCTTGATC ATCGTCTTTA CGCTACTCTT
GCGCGTGGTC AGCTTCATTC TCTTTTACCG GTACAGAAGC AGACGCTATC GCGCGCTCTT
GCGGGGAGCT TCGAGAGGGA CTTGTGTGTC ACAGCTCCTA CCGGGAGCGG TAAAACTCTC
TCCTATTTGC TACCTGTGTT ACAGATACTT TCAAAGCGAG TATCGAAAGC CGAAACAGTG
TGCCTGATTC TTGTACCGAG TGGCGATCTT TCCGCACAGG TATGCGTCGC CGCTAGTGAA
CTCTGCAAAG CATTGCACGT ACAGATTTCT ATTGTTGGGA AAAGTCGCAA TACAACCAAT
TCAACTAAAC TAGTGAACAA GCGATATCGA CGGCTATTGG CTCAAAATAG ACAGCGTATG
TATCAGTGTT GTATCACGCG CCAGTTTGCG CGACATAATT CGCTGGATGT GCCTTCACAA
ATACTTGTAG CGTCTCCTGG AAGGTTTGCT GCACATCGGA CGAGTATTCT CAAGAAATTG
AAATTGTTAG TCATCGATGA GGCGGACAGA ATGCTTCAAC AATCATATCA AAACTGGCTC
GTTACGCTGG ACTATGAAAT GTGTGCGCGA ACACGTCAGT GTCGGCGTCT CACTGTGGGT
GAACGAAACT CTGAAAGACT GCAACTTATA TTTTGTTCAG CAACATTGCA AAGTTCGTGT
CTACAAAGGG TTGGAGCTTT CGCACTTGAT CGAATCAATG CTTATGATAG TGTCTGTCCA
CTTTTGCCTA TTACGCTGTC TGAGTATGCG ATTGTTGCGG AACACACTGA TAAGTTTGAT
GCTCTTGTCT CGCTACTTGA ATTTTTCAAG GGTGAAAAAG TTATTGTCTT CTCTGCCTCG
GTATATCGTG CTAGACATAT ACTACAGCGG TTGAATAAAT TAGAAAATTT GCCCTGTTTC
GAGTATAGCA GTGACGCAAA CCTTCGAAGA CGAGCATCTA CGCTTCAAAA CTTCCAGCGC
TGCCAGGGAG GTGTCCTTGT TGCTTCAGAT GCCGCTGCAC GAGGTTTACA CATCGATGCA
GTATCGGCTG TGATATCTTT TGACGCTCCT GAGCATTTCG AGACGTATCT GCATCGAGCT
GGAAGAACGG CGAGGGCAGG CAAAACGGGC AAATGTATCA CGATTTGTTC GACAGCACGT
GAAGCACAAA CTTTCATAAA ACGAGTTCAG CGCCATGTCC CAATACTCCT TTCAACAGAG
CTTCAAGGCT CGACTATTTA G
|
|---|
| Protein sequence | MRAFVSGEKL RKRNGHDMNG ECPRQITPVS PLDHRLYATL ARGQLHSLLP VQKQTLSRAL
AGSFERDLCV TAPTGSGKTL SYLLPVLQIL SKRVSKAETV CLILVPSGDL SAQVCVAASE
LCKALHVQIS IVGKSRNTTN STKLVNKRYR RLLAQNRQRM YQCCITRQFA RHNSLDVPSQ
ILVASPGRFA AHRTSILKKL KLLVIDEADR MLQQSYQNWL VTLDYEMCAR TRQCRRLTVG
ERNSERLQLI FCSATLQSSC LQRVGAFALD RINAYDSVCP LLPITLSEYA IVAEHTDKFD
ALVSLLEFFK GEKVIVFSAS VYRARHILQR LNKLENLPCF EYSSDANLRR RASTLQNFQR
CQGGVLVASD AAARGLHIDA VSAVISFDAP EHFETYLHRA GRTARAGKTG KCITICSTAR
EAQTFIKRVQ RHVPILLSTE LQGSTI
|
|---|
| |