| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | OSTLU_29121 |
|---|
| Symbol | |
|---|
| ID | 4999746 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ostreococcus lucimarinus CCE9901 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_009355 |
|---|
| Strand | - |
|---|
| Start bp | 850764 |
|---|
| End bp | 852072 |
|---|
| Gene Length | 1309 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | |
|---|
| GC content | 58% |
|---|
| IMG OID | 640415167 |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_001415951 |
|---|
| Protein GI | 145341718 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
|---|
| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.429141 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GACGCGGACG ACGCGCGTCA TGGGCGTCCC GAGCGCGGAG GACGTCGAGT TCGGCGACGC
GGATAAAAAG ATCATCCCCC TGGACGAGGA CGACATCGCG CTGCTGAAGA CGTACGGGTT
GGGGGCGTAT AACGACGCGA TTAAAGATCT CGAAAACGAC CTGAAGACGA TCAGTAAGCG
CGTGAACGAC TTGTGCGGGA TCAAGGAGAG CGACACCGGG CTGGCGCCGC CGTCGCAGTG
GGATTTGACG GCGGATAAAC AGGCGTTCCA GGAGCAGCAA CCGTTGCAAG TGGCGAGATG
CACGAAGATC ATCAACCCGG GGACGGAGGA CGCGCAGTAC GTGATAAACG TGAAACAAAT
CGCAAAGTTC GTCGTGGGTT TGGGGAACGA GGTGGCGCCG ACGGACATTG AGGAGGGGAT
GCGGGTGGGG GTGGACCGGA ATAAGTATTT CATACAGTTG CCGTTGCCAC CGAAGATCGA
TCCGAGCGTG ACGATGATGA CGGTTGAGGA AAAGCCCGAC GTGACGTACG GCGACGTCGG
GGGGTCGAAA GAACAGATTG AGAAGCTTCG CGAAGTCGTG GAGTTACCGT TGTTGCACCC
CGAGAAGTTC GCGAAGCTTG GGATCGATCC GCCGAAAGGG GTATTGTGTT ACGGGCCGCC
GGGGACGGGT AAGACGCTCC TGGCGCGCGC GGTGGCGAAT CGCACGGATG CGTGTTTTAT
TCGCGTCATC GGGAGCGAGT TGGTGCAAAA GTACGTCGGG GAAGGTGCGA GGTTAGTTCG
AGAGCTGTTC CAGATGGCGA GGAGCAAAAA GGCGTGTTTG ATTTTTTTCG ACGAAGTCGA
CGCCATCGGC GGCGCTCGCT TCGACGACGG TCAAGGCGGA GACAACGAAG TGCAGCGTAC
GATGCTTGAG ATTGTGAACC AGCTCGATGG GTTCGACGCC AGAGGCAACA TCAAGGTATT
GATGGCCACG AATAGACCCG ACACTCTGGA TCCGGCGCTG TTGCGTCCCG GGCGTCTCGA
CCGCAAGGTT GAATTCGGCT TGCCCGACTT GGAGTCCCGA ACGCAAATTT TCAAGATTCA
CACCCGCTCC ATGGCTGTCG AGCGCGACAT TCGCTACGAA CTTTTAGCGC GCCTGTGTCC
CAACGCCACC GGGGCGGAGA TCCACTCCGT GTGCACCGAA GCCGGCATGT TCGCCATTCG
CCAGCGCCGG AAAACCGTCG GCGAAAAGGA TTTCTTGGAC GCCATCAACA AAGTCATCAA
GGGCTATCAA AAGTTCTCCT CCACCGCGAA GTACATGCAG TACAACTAG
|
|---|
| Protein sequence | MGVPSAEDVE FGDADKKIIP LDEDDIALLK TYGLGAYNDA IKDLENDLKT ISKRVNDLCG
IKESDTGLAP PSQWDLTADK QAFQEQQPLQ VARCTKIINP GTEDAQYVIN VKQIAKFVVG
LGNEVAPTDI EEGMRVGVDR NKYFIQLPLP PKIDPSVTMM TVEEKPDVTY GDVGGSKEQI
EKLREVVELP LLHPEKFAKL GIDPPKGVLC YGPPGTGKTL LARAVANRTD ACFIRVIGSE
LVQKYVGEGA RLVRELFQMA RSKKACLIFF DEVDAIGGAR FDDGQGGDNE VQRTMLEIVN
QLDGFDARGN IKVLMATNRP DTLDPALLRP GRLDRKVEFG LPDLESRTQI FKIHTRSMAV
ERDIRYELLA RLCPNATGAE IHSVCTEAGM FAIRQRRKTV GEKDFLDAIN KVIKGYQKFS
STAKYMQYN
|
|---|
| |