Gene Mflv_5558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5558 
Symbol 
ID4976949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009339 
Strand
Start bp305620 
End bp307014 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content65% 
IMG OID640459784 
Productreplicative DNA helicase 
Protein accessionYP_001136807 
Protein GI145226153 
COG category[L] Replication, recombination and repair 
COG ID[COG0305] Replicative DNA helicase 
TIGRFAM ID[TIGR00665] replicative DNA helicase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00148847 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGATC TCGACGACGC TCCAGCGCGT ACCCAGCACC GACGGCCGGC GGAGCCCTAC 
ACCGATCTCG ACGATGCTCG CCAACCACCG CAGGACCTAG CGGCCGAGCA GTCCGTACTG
GGCGGGATGA TGCTGAGCAA GGATGCGATC GCCGATGTGC TCGAACGGCT GCGGCCCAAG
GACTTCTACC GGCCCAACCA TCAACAGATC TACGACGCGA TCCTGGACCT GTTCGGCCAG
GGCGAACCGG CGGACGCGGT GACCGTCGCC GCCGAACTCG ATCGACGCGG AGTGCTGCGG
CGTGTCGGAG GAGCCCCCTA CCTGCACACG CTGATCGCCA CGGTTCCCAC GGCCGCCAAT
GCCGGCTACT ACGCCGGCAT CGTCGCCGAG AAGGCCGTCC TGCGCCGCTT GGTGGAGGCC
GGCACCCGGG TGGTGCAGTA CGGCTACGCC GGCGCCGACG GCGCCGACAT CGCCGAGGTC
GTCGACCGCG CCCAGGCCGA GATCTACGAC GTCACCGAGG ACCGCGGCAG TGAGGACATG
GTGGCGCTGG AGGACCTGCT GCAGCCCACC ATGGACGAGA TCGACGCGAT CCAGGCCGGC
GGCGGTCAAG GCCAAGGAGT TCCGACCGGA TTCGCCGATC TCGACGAAGT GACCACCGGC
CTGCACGGCG GGCAGATGGT CATCGTCGCG GGCCGTCCCG GCCAAGGGAA ATCGACTCTG
GCACTTGACT TTATGCGGTC CTGCTCAATC AAGCACGGAC ACGCGAGCGT CATCTTCAGC
TTGGAGATGA GTAAGTCCGA GATTGTGATG CGACTACTGT CGGCTGAGGC CCGCATCAAA
CTGGCCGACA TGCGCGCCGG CCGGATGAGC GACGACGACT GGACGCGCAT GGCCCGGCGG
ATGGGCGAGA TCTCCGACGC CCCGTTGTTC ATCGACGACT CCCCGAACCT GACCATGATG
GAGATCCGCG CCAAGGCGCG CCGGCTCAAG CAGAAGACAG ATCTGCAGCT GATCGTGGTG
GACTACCTGC AGCTGATGAC CTCAGGCAAA AAGGTGGAGT CCCGGCAAAC AGAAGTGGCG
GAGTTTTCGC GCAGCCTCAA GTTGATGGCC AAGGAACTTG ACGTGCCGGT GGTCGCGGTC
TGCCAGCTCA ACCGCGGACC CGAACAGCGT GTCGACAAGG TTCCACAGCT CTCTGACCTG
CGCGAGACCG GTCAGCTGGA ACAGGATGCC GACTTGGTAA TCCTTATCAA CCGCCCGGAC
GGCTACGACC GGGACAGCCC ACGGGCCGGT GAAGCAGACC TCATCCTGGC AAAGCACAGG
AACGGGCCAA CGAGAACCTG CACCGTGGCG TCAACTCTTC ACATGTCCTC GTTCCGCGAC
CTCGCCCGCG GATAA
 
Protein sequence
MTDLDDAPAR TQHRRPAEPY TDLDDARQPP QDLAAEQSVL GGMMLSKDAI ADVLERLRPK 
DFYRPNHQQI YDAILDLFGQ GEPADAVTVA AELDRRGVLR RVGGAPYLHT LIATVPTAAN
AGYYAGIVAE KAVLRRLVEA GTRVVQYGYA GADGADIAEV VDRAQAEIYD VTEDRGSEDM
VALEDLLQPT MDEIDAIQAG GGQGQGVPTG FADLDEVTTG LHGGQMVIVA GRPGQGKSTL
ALDFMRSCSI KHGHASVIFS LEMSKSEIVM RLLSAEARIK LADMRAGRMS DDDWTRMARR
MGEISDAPLF IDDSPNLTMM EIRAKARRLK QKTDLQLIVV DYLQLMTSGK KVESRQTEVA
EFSRSLKLMA KELDVPVVAV CQLNRGPEQR VDKVPQLSDL RETGQLEQDA DLVILINRPD
GYDRDSPRAG EADLILAKHR NGPTRTCTVA STLHMSSFRD LARG