Gene Mflv_5540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5540 
Symbol 
ID4976931 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009339 
Strand
Start bp286758 
End bp288179 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content70% 
IMG OID640459766 
ProductNLP/P60 protein 
Protein accessionYP_001136789 
Protein GI145226135 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.981915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.121534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACACAG TCCTTCCTAC CCAGGGCCCG CTGGATCCCA ACGGCGGCGA CCTCCTCGGT 
GTCCCCGACG GCGACAAGCA GGCCGACCAG ACCACCACGA CACCGCCTCC CCTCGGTAGC
GAGGACACCC AGGCCGGCCC CGTACCGATC CGCGTTCCCC CACTGGGAAG CGCCGCGCAA
CCGCCCGCCA CCGGTTCCGC AGTGCCCGTC GCCACGACGA ACACCGCACC TCCGCCAGCT
CCAGGTGGCC CTGCCGCACC GACGCCCACC ACCACAGACA CCCCCGCTGC AACACCAGAC
GCAGAAGCGA CAACCGACGC CGACGCCGAC GAGGACCAAG CCCCCTCCGA CACCGAACCT
GAGACCGAAC CCGATGCCGA CGCCGAACCG GAGATCCCCC AGGAAGCACT GGACGCCCTC
AACGGCCTGG CCACTCTCGG CCCCCAGATC GCCTCGCCCC TGCTCAACGC AGCCACCGGC
ATCCCCGCCG CCGCCCTGCA AGGTGCCGGC GGCCTCGTCC CCGCCCTCAC CTCCGCCGTT
CTGCCCCAGC TGGCTGCCAT GCTCGACCAA CTCGGCACCA CCGCACCCCC CGGATCGCCA
GCAGCACGCA TCGGCACAGC CGGCGCCGAC GGACTGGCCG GCGCCCTAGG ATCACTGGCC
GGAGATGGCA GGGCGGCCGA CGCCGCGCGC GCCACCAACC AAACGCTTGC CCGCCAAGTC
GGAGCATTGC GCGACGTGGA ACAACAGCTC GGCGACATCC TAGGGCTGTC CTCGGCACGC
ACCGAAGCTG ACAGAGCCAA GATCCAAGGC ATCATCGACG ACGTTGAAAC CGCCCTCACG
TCCGCCGGCG TGCAAGGCAA CACACCCGAA GCCCAAGCTG CGGTCCTATC TGCACTACGC
AGCGCCCTCG ACGAAGCCGG CGATGTGGTC AGCGGCGCCG CCCGGGACAA ACTCAGCGAC
GCCGCGTTCG TCCGAGAGCT GATCAGCAAC TACCTCAACA TTTCCAGCGA GCTCGACACC
CTCCACGCCG GTGTCGCCGG CAGCGGCACC GGCGTCAGCG CCGCCCGCGC CGCCCATGAG
GCGCTCGGCC TGCCCTACGT CTGGGGCGGC GGCGGCGCCC TGGGCCCAAC CGGCGGCGGA
TTCGACTGCA GCGGCCTCAC CCAGTACGCC TACGCCCAGG GGTCCGGCGG GCGCATCATG
CTGCCACGCA CCACCTACGA ACAGATCAAG GTGGGCCGAC AAGTCCCGAT GGGCGCGCTG
GCTCCGGGAG ATCTCGTGTT CAGCAACTTC TCCGCGCCGG GGGTTCCCGA GCACGTGGGC
ATCTACATCG GTGGCGGCCA GGTCATTCAC GCACCCCAGC GTGGCCAGGA CGTGCAGATC
AGCTCCGTCC CGTCCGGCGG GCAAGCACGG CGGGTGATGT GA
 
Protein sequence
MNTVLPTQGP LDPNGGDLLG VPDGDKQADQ TTTTPPPLGS EDTQAGPVPI RVPPLGSAAQ 
PPATGSAVPV ATTNTAPPPA PGGPAAPTPT TTDTPAATPD AEATTDADAD EDQAPSDTEP
ETEPDADAEP EIPQEALDAL NGLATLGPQI ASPLLNAATG IPAAALQGAG GLVPALTSAV
LPQLAAMLDQ LGTTAPPGSP AARIGTAGAD GLAGALGSLA GDGRAADAAR ATNQTLARQV
GALRDVEQQL GDILGLSSAR TEADRAKIQG IIDDVETALT SAGVQGNTPE AQAAVLSALR
SALDEAGDVV SGAARDKLSD AAFVRELISN YLNISSELDT LHAGVAGSGT GVSAARAAHE
ALGLPYVWGG GGALGPTGGG FDCSGLTQYA YAQGSGGRIM LPRTTYEQIK VGRQVPMGAL
APGDLVFSNF SAPGVPEHVG IYIGGGQVIH APQRGQDVQI SSVPSGGQAR RVM