Gene Mflv_5354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_5354 
Symbol 
ID4976759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009339 
Strand
Start bp84169 
End bp85713 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content64% 
IMG OID640459582 
Producthypothetical protein 
Protein accessionYP_001136605 
Protein GI145225951 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGCA CCCCTCCTGT ACCCGAAGAT CATCCGTCAT CTCAACCGCT GCCCGGAGTT 
GGAGCCGGCA CCGCCGCGAT CCTTGTGTTC ACCTCCTCGG CGGCGGTGCT GGTGGTGGAA
ATCACCGCGC TGCGGTTGCT TGCGCCGTAC CTCGGGCTGA CCCTGGAGAC CAGCACCCTG
GTCATCGGAA TCGCCTTGGC CGCAATTGCC CTTGGGTCCT GGGCGGGCGG CCGGCTTGCC
GACCGCGATG ATCCGCGCCG CTGGCTGGGG ACATCGCTGG GGGTATCAGG TGTAGTCGTG
GCGTTCACGC CTTCCGCCGT CCGCGCGGCG GCCGAATGGG CACCTGCGAC GCTGTTGATA
GTCGCGACGC TCACGATTCT GGCACCCGGA GCGCTGCTAT CGGCGGTGAC ACCGATGGTG
ACCAAGCTGC GCCTGATCAA GCTCGCCCAG ACCGGCACCA TTGTCGGTCA GTTGTCTGGT
GTAGGCACCA TGGGTGCCAT CGCCGGCACC GTGCTTACCG GATTTGTCTT CGTATCGCGG
ATGCCAGTGA GCGTGATACT CATCGGCCTC GGATCGATAC TGGTACTCGG CGGCATCGTT
GTGGAGTGGC GCATGCGCCG ACGGAACACC TTAAGCGCCA TCGTAATAAC GCTTGCAACC
GTCGGCGCGG GCCTGGCTGG CTATCTCGCA CCCGGCGGTT GCGACGTGGA AACCAAATAC
CATTGCGCCC GCGTCATCGC CGACCCGGAG CGAGACAGCG GCCGAATCCT CATGCTCGAT
GGCGCGCGCC ACTCGTACAT AGACCTCCAA GATCCGGCTC TCCTGCAATT CATCTACGTG
CGCGCCTTTG CTTCCGTCGT CGACGCATCC TTCCCCTCCG AGAAGGCTTT GGAGGCGTAC
CACCTTGGTG GGGGCGGCCT CACCTTCCCG CGGTACCTTG CTGCGACGCG GCCAGGAAGC
CACAACGTGG TGTCCGAAAT CGACGGTGGC GTGGTGCGCA TAGACCGAGA CGAACTCGGA
TCGGCTTCCA ACGCTGGGAC ACAGGTGCGC GTCGAGGACG GCAGACTGGG CCTTGCGGGG
CTCGATGACG GCAGCCGTGA TCTGATCGTC GGCGACGCCT TTGGCGGCGT GAGCGTGCCG
TGGCATCTGA CGACTGTGGA GTCGCTGACA GACATACGTC GAGTCCTCAA AAAGGACGGT
GTGTACGTTG CTAATCTCAT CGATTACGGC GAGCTGGCGT TTGCGCGTGC CGAAGTCTCA
ACACTCACAA AGGTTTTCGA CTACGTCATA GTCGCCGCCG AGGCCGGCGA CGTCGGCGTC
GATACCGCTG CGACACCCGA TGGTGGCAAC CTGGTCGTGC TCGCTTCCGA TCGACCAGTT
GACCCGGGCG CGCTTCAGCG CGTTCTGAAC ACCCGCAAGA CCGGGTGGAC GATCACTGCC
GGCGACGATC TCCGCAGGTG GATCGGCGAC GCGCGAGTTC TGACAGACGA CTACGCTCCC
GTCGATCAGC TTCTCGATCC CTACCGTCGA CAGAGCGGCG AGTGA
 
Protein sequence
MTGTPPVPED HPSSQPLPGV GAGTAAILVF TSSAAVLVVE ITALRLLAPY LGLTLETSTL 
VIGIALAAIA LGSWAGGRLA DRDDPRRWLG TSLGVSGVVV AFTPSAVRAA AEWAPATLLI
VATLTILAPG ALLSAVTPMV TKLRLIKLAQ TGTIVGQLSG VGTMGAIAGT VLTGFVFVSR
MPVSVILIGL GSILVLGGIV VEWRMRRRNT LSAIVITLAT VGAGLAGYLA PGGCDVETKY
HCARVIADPE RDSGRILMLD GARHSYIDLQ DPALLQFIYV RAFASVVDAS FPSEKALEAY
HLGGGGLTFP RYLAATRPGS HNVVSEIDGG VVRIDRDELG SASNAGTQVR VEDGRLGLAG
LDDGSRDLIV GDAFGGVSVP WHLTTVESLT DIRRVLKKDG VYVANLIDYG ELAFARAEVS
TLTKVFDYVI VAAEAGDVGV DTAATPDGGN LVVLASDRPV DPGALQRVLN TRKTGWTITA
GDDLRRWIGD ARVLTDDYAP VDQLLDPYRR QSGE