| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5152 |
|---|
| Symbol | |
|---|
| ID | 4976463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 5484842 |
|---|
| End bp | 5487181 |
|---|
| Gene Length | 2340 bp |
|---|
| Protein Length | 779 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640459382 |
|---|
| Product | AAA ATPase |
|---|
| Protein accession | YP_001136406 |
|---|
| Protein GI | 145225728 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.430692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGC TGGTCCTCAC CGAGGAGTTC CGTGAGGCGC TGGCCCTGCT CGCCGGGGGA
CGGCACGTGT TCCTGACGGG CAAGGCGGGC ACCGGTAAGT CGACGCTGAT CCGTCGCTTC
ATGGCGGACA CCGACCGCAA CGTGGTGGTG GTCGCGCCGA CGGGGATCGC CGCGCTCAAC
GTCGACGGCT ACACGATCCA CCGCATGTTC GGCTTCCGCT CGACGACGAC GCTCGACGAC
GTCCGCTCCG GCGAGTATCG CCCGGGGCGG TTCACCAAGA CGCTGGCGGC GTTGCAGACG
CTGATCATCG ACGAGGCGTC GATGGTGCGC GCCGACGTGT TCGACATGGT GGCCGCGGCG
CTGGAACGCT TCGGGCCCGA GCCGGGCACC CCGTTCGGCG GGGTGCAGAT CGTGCTGGTC
GGGGACCTGT ACCAGCTCCC ACCGGTGGTC CGCGAGGACG AGGCCACCTA TTTTTCCACG
ACGTATGGGA CGCCGTACTT CTTCTCCGCG AACGCGTTTC ACCGCGACGA CTTTCCGACG
GTGTCGTTGA CGACGGTGTT CCGCCAACTC GGTGACGACC GGATGACGGC TATTCTCAAC
GAGATTCGCG AGGGTGTGCT CCTCGGGCAC GCCCAGGAGC AACTCAATGC GCGCGCCGAC
AAGGACTTCG TACCACCCGA GGACGAGTTC TGGCTGACGC TGGCCCCGAC GAACCGGCTC
GTCACCGCAC GCAACCGACA GCAGCTGGAA CGCCTTCCTG GTGAGGAATT CACCCACCAC
GCCAAGGCTT CCGGTGACCT GGCGATGTTC GAAGCGCCGG TCGAGGAGAC GCTGCGGTTC
AAGGTCGGCG CGCAGGTGAT GATGCTGAAC AACGACCAGG GCAACCGGTG GGTCAACGGC
ACCGTCGCGC GCGTCGTCGG GGTCGGCTAC GACCGGTACG GCGCGGTCGT CGAGGTCGAG
TTTCCCGACG GCACCAGTGC GGACGTCTCC CCGTTCACGT GGGAGGTGAC GCGCCCGGTG
ATGTCGGGGT CGTCGCTGAG TCGTGAGGTC GTCGGCGCGT ATACGCAGTT GCCGTTCAAG
CTGGCGTGGG CGATCACGAT CCACAAGAGC CAGGGACAGA CGCTGGAGCG GGTGGTCGTC
GACCTGACCG GGGGTATGTT CTCGACGGGT CAGCTGTATG TGGCGCTGAG CCGCTGCACC
TCGCTGGCCG GCCTGGTGCT GAAACGCCCT GTGCTGCCGA AGGATTTGAA AACCGATCGT
CGTGTCACCC GCTATCTGCG GACCTCCTCC GGCGCTGCCG GGGCTCGGCG GTACTGCGCG
ATCGGCATGC TGACCGTCGG CGACGAGGGA CGGATGTCAC GTCCGCGGCC CGTCGAGCTC
GCGGTGGCGT TCGACGACGG CACTGCGGTC ACCACGCTGG TGAACCCGCA GCGCGATCTG
GCCGATGCGC GAAAGGCGTT CGGTATCACG GTGTCCGATG TGCTGTTGGC ACCGACACTG
CGTGAGGCGT GGGCGGTGAT CGCGCCGATG CTGGCCGGCG CCACCCCGGT GGGCCCCGGC
GTGGACGAGA CGCTCGGCCT GCTGGACTTC GAGCTGAAGC GGCTGGGTTT CGTGACGCCG
ATGCCGCTGG GTGTCGAGGT GCGCGGCACG CGGGCGCAGG GCCGTACCGC GCTGGAACGC
GCCCGCTCCG CATTGCAGGC ACACCGCGCC GCCGACGCCG AGGACGGTTC CTCGACGTTC
GACGATCCCG AAACCGTTGA ACTGTCAGGA CTTCTGGTGA GCCGTGATGC GTCGGTGCCG
ACGCCGGTGG CCGATCATCT GCCGGGTCTG TCGGCGCTGC TGCGGATCAG CCGCGACGTC
GGGTCGGTGC TGTTGGGCGG CACCGCGCCG CCGCGCGACG ATGCGACCGG CTGGGAGGCC
GGTGCCCGGC AGTCGGTCGC CGATCAGCTG CGCGTCGCGG CGAACCGCGT GCAGCTGACC
GACGAGGTGC TGTCCCGCCT GCACGCCGCC GAGGAGCTGC TCGGCGTCGA AATACTCTCG
GGCACCGAAC TTCTGGATCG TCCTGATGTC GACGGGATCC TGGCCCCGGG CGCACGCATC
TGTTTCACCG GCACGGCGCA GGATCCCGAC GGCCGGGTGG TTGAACGCGA TGAGATGGAA
CGCCTGGCCA CCGCCGCGGG TCTGGTACCG GTGAAGTCGG TGACGAAGAC CCGCTGCGAC
GTGCTGGTGA CCGCGGAGGC GGGCACGCAG TCGGGTAAGG CCCGCAAGGC GCTGGAGTAC
GGCAAGCCGG TGCTGTGCGC CGACGACTTC TTCGCCTGGC TCGCCGCGCA CGGACCCTGA
|
|---|
| Protein sequence | MTELVLTEEF REALALLAGG RHVFLTGKAG TGKSTLIRRF MADTDRNVVV VAPTGIAALN
VDGYTIHRMF GFRSTTTLDD VRSGEYRPGR FTKTLAALQT LIIDEASMVR ADVFDMVAAA
LERFGPEPGT PFGGVQIVLV GDLYQLPPVV REDEATYFST TYGTPYFFSA NAFHRDDFPT
VSLTTVFRQL GDDRMTAILN EIREGVLLGH AQEQLNARAD KDFVPPEDEF WLTLAPTNRL
VTARNRQQLE RLPGEEFTHH AKASGDLAMF EAPVEETLRF KVGAQVMMLN NDQGNRWVNG
TVARVVGVGY DRYGAVVEVE FPDGTSADVS PFTWEVTRPV MSGSSLSREV VGAYTQLPFK
LAWAITIHKS QGQTLERVVV DLTGGMFSTG QLYVALSRCT SLAGLVLKRP VLPKDLKTDR
RVTRYLRTSS GAAGARRYCA IGMLTVGDEG RMSRPRPVEL AVAFDDGTAV TTLVNPQRDL
ADARKAFGIT VSDVLLAPTL REAWAVIAPM LAGATPVGPG VDETLGLLDF ELKRLGFVTP
MPLGVEVRGT RAQGRTALER ARSALQAHRA ADAEDGSSTF DDPETVELSG LLVSRDASVP
TPVADHLPGL SALLRISRDV GSVLLGGTAP PRDDATGWEA GARQSVADQL RVAANRVQLT
DEVLSRLHAA EELLGVEILS GTELLDRPDV DGILAPGARI CFTGTAQDPD GRVVERDEME
RLATAAGLVP VKSVTKTRCD VLVTAEAGTQ SGKARKALEY GKPVLCADDF FAWLAAHGP
|
|---|
| |