| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_5109 |
|---|
| Symbol | |
|---|
| ID | 4976420 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5433407 |
|---|
| End bp | 5434012 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640459336 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001136363 |
|---|
| Protein GI | 145225685 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.313188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.176776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGGTG CGCCCCATGC GACGCGGTGG GCCGGGGTGC CGCTGACCGA CCGCCGGGCC
GAGCGCCGGG CACTTCTGGT CGACGCGGCG TTCCGGTTGT TCGGCGACGG CGGCGAGTCC
GCGGTGTCGG TGCGCTCGGT ATCGCGGGAA TGCGGACTGA ACACGCGCTA CTTCTACGAG
AGCTTCGGCG GCACCGACGA CCTGCTCGGT GCGGTCTACG ACCGGGTGAG CGCGGAGCTC
TCGGTGGCGG TCGCCGACGC GATGGACCAC GCCGAGGACT CACTGCGGGC CCGCACGCGC
GCCGGGATGG CCGCGGTGCT GCACTTCAGC TCCGCCGACC CGCGTCGCGG CAGGGTGCTG
TTCACCGATG CGCGGTCCAA CCCGGTGCTG ACCGCGCGGC GCGCCGCCAC CCAGGACCTG
CTCCGCGAAG CCGTGCTGAC CGAGGGCTGG CGGCTGCACC CCGACACCGA TCCCGTCGCC
GCGGCCACGG GCGCCGCGAT GTACACCGGT GCGATGGCCG AACTTGCCCA GCAGTGGCTG
TCGGGCAACC TCGGTGACGA CCTCGACGTC GTGGTCGACC ACGCGCTGCG TCTCGTGCTG
CGCTGA
|
|---|
| Protein sequence | MSGAPHATRW AGVPLTDRRA ERRALLVDAA FRLFGDGGES AVSVRSVSRE CGLNTRYFYE
SFGGTDDLLG AVYDRVSAEL SVAVADAMDH AEDSLRARTR AGMAAVLHFS SADPRRGRVL
FTDARSNPVL TARRAATQDL LREAVLTEGW RLHPDTDPVA AATGAAMYTG AMAELAQQWL
SGNLGDDLDV VVDHALRLVL R
|
|---|
| |