| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4881 |
|---|
| Symbol | |
|---|
| ID | 4976192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5200526 |
|---|
| End bp | 5201113 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640459108 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001136135 |
|---|
| Protein GI | 145225457 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0263857 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGGC CCGCCCGATA CACCGTCGAT GTCCTGCTCG ATGCCGCCGC GGAACTGCTT
GCCGCCGAAG GTCCTGCGGC AGTGACGATG TCGGCGGTGG CGCGCAGTAC CGGCGCGCCC
AGCGGTTCGG TCTACCACCG TTTCCCCACC AGGGCTGCGC TGTGCGGGGA GCTGTGGGTG
CGCACCGAGG AGCGGTTCCA GGAGGAGTTG CTCGAGGCGC TCTCCGGTGA CGGCGACCCG
CAGAATCGCT GCGTGGCCGG GGCACTGCGC AACATGCAGT GGTGTCGCGA GAATCCGGTC
GAGGCCCACG TGTTGCTCGC CGGACCCGAC CAGCTCGACA TGGGGGAGTG GCCCGACACC
GTCGCGGGGC GTCGGAAACG TCTGCAGCGC AAGCTCCGTA AGGTGCTCGC GGAGATCGCC
GGCGACCACG GCCGAATCGA CGGCCGAGTC GACGGGCGCG TCGCGGCCGC GGTCATGGAT
GTTCCCGCCG CGATCGTGCG GCGTCATCTG AGGGCGCGTC AATCCATCCC GGCGGCGGCC
GACGACATCG TCGCCGACTG CGCGCGGGCG CTCATCTGCC CGAACTGA
|
|---|
| Protein sequence | MPRPARYTVD VLLDAAAELL AAEGPAAVTM SAVARSTGAP SGSVYHRFPT RAALCGELWV
RTEERFQEEL LEALSGDGDP QNRCVAGALR NMQWCRENPV EAHVLLAGPD QLDMGEWPDT
VAGRRKRLQR KLRKVLAEIA GDHGRIDGRV DGRVAAAVMD VPAAIVRRHL RARQSIPAAA
DDIVADCARA LICPN
|
|---|
| |