| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4836 |
|---|
| Symbol | upp |
|---|
| ID | 4976148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 5149440 |
|---|
| End bp | 5150114 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640459065 |
|---|
| Product | uracil phosphoribosyltransferase |
|---|
| Protein accession | YP_001136092 |
|---|
| Protein GI | 145225414 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0035] Uracil phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.213595 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGGA CGTCGCGAAT CCCGGTTCGG TTCCCGTTAA GGTCTGGATC CATGGATGTG
CGCGTTGTGG ATCACCCGCT GGCCGCGGCT CGGCTGACCA CCCTGCGCGA CGAGCGCACA
GACAATGCCG GATTCCGGGC GGCGTTGCGG GATCTCACGC TGATGCTCGT CTACGAGGCG
ACCCGCGAGC TCGCGACGCA CACCATCTCG GTGCGCACCC CGGTGGCCGA GACGGCCGGC
ACGAAGCTGG CCACGCCGCC GCTGCTGGTG CCGGTGCTGC GTGCCGGGCT CGGCATGGTC
GACCAGGCGC ACGAACTGAT CCCCGAGGCG CGGGTCGGCT TCGTCGGGGT GGCCCGCAAC
GAGGAGACCC ATCAGCCGAC TCCGTACCTG GAGTCGCTGC CCGACGACCT GAGCCGACAG
CCGGTGATTG TGCTGGACCC GATGCTGGCC ACCGGCGGCT CGATGGTGCA CACCCTGGAG
CTGCTCTACT CCCGCGACGC CGTCGACGTG ACCGTGATCT GCGTGGTCGC CGCTCCGGAG
GGGCTGGCCC TGGTGGAGAA GACGGCCCCG GAGTTGCGCC TGTACACCGC GGCGATCGAC
TCCGGCCTCA ATGACATCGC CTACATCGTG CCGGGTTTGG GTGATGCGGG TGACCGCCAG
TTCGGCCCGC GCTGA
|
|---|
| Protein sequence | MFRTSRIPVR FPLRSGSMDV RVVDHPLAAA RLTTLRDERT DNAGFRAALR DLTLMLVYEA
TRELATHTIS VRTPVAETAG TKLATPPLLV PVLRAGLGMV DQAHELIPEA RVGFVGVARN
EETHQPTPYL ESLPDDLSRQ PVIVLDPMLA TGGSMVHTLE LLYSRDAVDV TVICVVAAPE
GLALVEKTAP ELRLYTAAID SGLNDIAYIV PGLGDAGDRQ FGPR
|
|---|
| |