| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4460 |
|---|
| Symbol | |
|---|
| ID | 4975773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4748057 |
|---|
| End bp | 4748620 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640458689 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001135717 |
|---|
| Protein GI | 145225039 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.20619 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA GCGGCGAGAG CGCGGGTCGG CTGTCGGTCG ACGACTGGAT CCAGGCCGGT
TACGCGATCA TCGCCGACGA GGGACGGTCA GCGCTCAAGA TCGACCGTCT GTGCACGCGA
CTCGGGGTCA CCAAGGGCAG TTTCTACTGG CATTTCCGCG ATATGGCGGC CTACCGTGCG
GCGCTGGTGC AGGCGTGGGC CGAACTCCGG GACAGCGATC GCAGCCACTT CGGCGACCTG
GGCGACCTCA CTCCGCGCGA ACGCCTGACC CGGATGATGG CGTCGCTCCT GGGCGAGCGC
CAGTGGACGT TGGAGCGGGC GATGCGGGAA TGGGCCAGAA CCGACCCCGT GGTCGCCGAC
AGCGTCCATA ACGCAGACCT GCTGGTTCTG GGCGCGGTGC GCGATGCGTT TCTCGCCGCG
GGTTTCGACG ACGACGACGC CGACGTGCGC GCCAACGCGA CATTCGCCGC AGGTATCGGC
TTCCTGCATC TGTCCGCGGC GCCTCCCGAC GCGAGGCTGA CCGAACAACG GGAACGCTTT
CTCGATCTGA TGCTCAGCCG ATAG
|
|---|
| Protein sequence | MAKSGESAGR LSVDDWIQAG YAIIADEGRS ALKIDRLCTR LGVTKGSFYW HFRDMAAYRA
ALVQAWAELR DSDRSHFGDL GDLTPRERLT RMMASLLGER QWTLERAMRE WARTDPVVAD
SVHNADLLVL GAVRDAFLAA GFDDDDADVR ANATFAAGIG FLHLSAAPPD ARLTEQRERF
LDLMLSR
|
|---|
| |