| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_4411 |
|---|
| Symbol | |
|---|
| ID | 4975724 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4689850 |
|---|
| End bp | 4691436 |
|---|
| Gene Length | 1587 bp |
|---|
| Protein Length | 528 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640458639 |
|---|
| Product | long-chain-fatty-acid--[acyl-carrier-protein] ligase |
|---|
| Protein accession | YP_001135668 |
|---|
| Protein GI | 145224990 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.388176 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGTGC TCGCGACCGC GTTGTCGGAG GCCATGACCG CCTCGACGCG CGACCTGGTG
CTGCTCGATC GTGCCAGCGG CCAGTGGGTC CGCCATCCCT GGCAGGAACT GCACACCCGC
GCCGAGAACA TCGCCGAACA CATTCTCAAC GACCGCGACG GCGCCGTCGG TCTCGTCGGC
GAACCCACCG CCGAGCTGGT CTCGGCGATC CAGGGAACGT GGCTGGCGGG CAGGGCTCTG
GCCATCCTGC CGGGTCCGAT CCGCGGCGCC GATGAGCGCG AGTGGGCCGC CGCGACGGCG
CAACGCTTCG CCGGAATCGG CGTCGGCCAG ATCCTCACCT ATGGCGAGCA TCTGGAGTTG
TTGCGCCCCA ACGTTTTCGG TATCACGGTC CATGACCTCG CGGTCGTCGG GCACGCGCAA
CGCTCGACCA CACTCGTATC CGCACCGGCC GCCCCGGGCA CCCCCGCGGT GCTGCAGGGC
ACCGCCGGAT CCACCGGCAC CCCGCGTACC GCGCTGCTGT CCCAGGATGC GGTGAAGCAC
AACGTCGCCG GCATGCTCCG GCACACCGAC GTCGATCCCG GCCGTGACCG CGGCCTGACG
TGGCTGCCGC TGTATCACGA CATGGGGCTG ACCTTCCTGC TCACCGGATT CATGTCCGGC
AGCGAGATGT GGCTCGCGCC GACGGCGTCG TTCGCGGCGT CGCCGTTCCG CTGGTTGGCC
TGGCTGTCGG AAAGCCGAGC GGGCCTTACG GCCGCACCGA ATTTCGCGTA CTCCGTGATC
GGCAAGTATG CGCGACGCGT GCCCGACGTC GACCTGTCCA ACCTGCGGTT CGCGCTCAAC
GGCGGGGAAC CCGTCGACTG CGACGGTTTC GAGCTGTTCC TGCGCGAACT CTCCCGGTTC
GGGCTCGATC CCGGCGTGGC GGCCCCGTCG TACGGTCTCG CCGAGTCGAC CTGCGCCGTC
ACCTCCCCAC GACCCGGCAC CGGCTTGCTG GTCGACGACA TCACCGACCC GGACACCGGC
ACCCCTCGTC GTCACGCCGT GCTCGGCGAA CCGATCCCCG GCATGGAACT GCGGATCGCA
CCGTCGGAGG GCCGTCGCTC CGGTGAGCGC GAGATCGGAG AGGTCGAGAT CCGAGGCACG
TCGATGATGT CGGGCTACCT CGGCGAGGAG CCGCTGGCTC CCGGACAGTG GTTCCCCACA
GGCGATCTCG GCTACCTGAC CGACGCGGGC CTGGTGGTGT GCGGCCGGGT CAAGGAGCTC
ATCACCATCG CCGGACGCAA CATCTTCCCC ACCGAGGTCG AACGCGTGGC CGCCGAGGTG
CGCGGTGTCC GCGAGGGCGC GGTCGTCGCC GTCGGCACCG ACTCCGGGTC GGCGCGACAG
GGCCTGGTCA TCGCGGCCGA GTTCCGCGGC GCCGACGAGT CGGGCGCGAA AAGCGAAGTG
GTGCAACGGG TGGCGTCCCA GTGCGGCGTG GTGCCGTCCG AGGTGGTGTT CCTGAAGCCC
GGCTCGCTGC CCCGCACGAG CTCGGGAAAG TTGCGGCGCC TCGCGGTCAA GAACGACCTC
GACGGTCTTC GCGCCCCGGT GTCCTGA
|
|---|
| Protein sequence | MSVLATALSE AMTASTRDLV LLDRASGQWV RHPWQELHTR AENIAEHILN DRDGAVGLVG
EPTAELVSAI QGTWLAGRAL AILPGPIRGA DEREWAAATA QRFAGIGVGQ ILTYGEHLEL
LRPNVFGITV HDLAVVGHAQ RSTTLVSAPA APGTPAVLQG TAGSTGTPRT ALLSQDAVKH
NVAGMLRHTD VDPGRDRGLT WLPLYHDMGL TFLLTGFMSG SEMWLAPTAS FAASPFRWLA
WLSESRAGLT AAPNFAYSVI GKYARRVPDV DLSNLRFALN GGEPVDCDGF ELFLRELSRF
GLDPGVAAPS YGLAESTCAV TSPRPGTGLL VDDITDPDTG TPRRHAVLGE PIPGMELRIA
PSEGRRSGER EIGEVEIRGT SMMSGYLGEE PLAPGQWFPT GDLGYLTDAG LVVCGRVKEL
ITIAGRNIFP TEVERVAAEV RGVREGAVVA VGTDSGSARQ GLVIAAEFRG ADESGAKSEV
VQRVASQCGV VPSEVVFLKP GSLPRTSSGK LRRLAVKNDL DGLRAPVS
|
|---|
| |