Gene Mflv_4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_4275 
Symbol 
ID4975588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4540213 
End bp4541655 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content70% 
IMG OID640458502 
ProductGntR family transcriptional regulator 
Protein accessionYP_001135532 
Protein GI145224854 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.310254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.794822 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAG CACTGGCTAC CAGATCGCTC AATGTGGACC TCCTGGCTCG CGAGCTCGGC 
AACTGGCGAA CCTCCAGTCG TAGCGGGCCC GCCTATCACG GCCTGGCTGA CGCGATCCGT
CTGCTGATCG TCGACGGCCG ATTACCGGTG GGCGCCCGCA TTCCCAGCGA GCGCGCGCTC
TCCGAGGCTC TGCGGGTGTC CCGCACAACG GTCACGGCCG CCTACACCCA GTTGCGCGAG
GACGGGTACC TCAACGCCCG CAGAGGCGCC CGCAGCACCA CCGCGCTCCC GCTGACGCCC
ACGCCGGCGC TGCGGCCCGT GACCGCCACG GCCAATCTCG CCGCCGCCAC ACTCGCCGCG
CCGGCCTCGG TGACCGCTCG TGCCTTCACC GAAGCCGCCG ACATGGTCGC GCCGTATCTG
CAGGAGATCG GGATCGAACT CACCGGGGTG CCCCCGCTCA GGGCAGCGAT CGCCGAAAGA
TACTGTGCGC GCGGACTTCC CACGGATGTC GACGAGATCA TGGTGACCAC GGGCGCATTG
CACGCGATCA GCCTGATCCT GGCGACCTAC ACCCAGCCCG ACGACAGGGT CCTCGTCGAA
CAGCCGACCT ATCACGGCGC GCTCGCCGCG ATGGCCTCCC GGGGTCTGCG ACCCGTGCCC
GTCGCGATGG CGCCCGACGG CTGGGAACTC GACGCCGTCG AGGCGGCCAT CCGCCAACTG
GCCCCCGAAC TGGCCTACCT GATCCCGGAC AATCAGAACC CCACCGGCAT GACGATGCCG
GTCGGCGACC GCGCCCGGCT GGCCCGGATC ATCAGCGAGA CGAAGACCCG GACCATCATC
GACGAGACCA TCACCGACAT GTGGCTCGAC GAACAGGTGC CACCACCGCT GGCCACCGAG
GTGACATCGC GTCCGGATCT GGTGATGACC GTCGGGTCGA TGTCGAAGTC CTTCTGGGGC
GGCCTGCGGA TCGGCTGGAT CCGGGCCGAG CGGAGCACGC TCGCGACCAT CGCGACGCTG
CGGCCCGCGA TCGACATGGG TACACCCATC GTCGAACAGC TCGCTGCAGC AAGGCTGTTG
GCCGCCGATG AGGAAGTGCT TCCGGAGCGC CGGGACATTC TGCGGTCTCG TCGGGCGCTG
CTTCTCAGGC TGCTCGCCGA GCACCTTCCC GACTGGCAGC CGGTGCCCGG CAAGGGGGGG
ATGTCGGTCT GGGTGCGGTT GCCCGCGCCC ATGAGCTCGG CACTGTCGGC CGCCGCGTCG
CGGATGGGGC TGGAGATCCC CCCGGGCCCG CGGTTCGGGG TGGACGGCAC GCTGGAGCGG
TTCATCCGGG TGCCGTACAC GCTGCCCGAC GCTCAACTCG TCGAGGCGAT CGAGCTGCTC
GCCCGTGCCT GGCGCAGCGT CACCGGGCTC ACGGCACCCG AGCCGGCCAC CGTCGTGGTC
TGA
 
Protein sequence
MTEALATRSL NVDLLARELG NWRTSSRSGP AYHGLADAIR LLIVDGRLPV GARIPSERAL 
SEALRVSRTT VTAAYTQLRE DGYLNARRGA RSTTALPLTP TPALRPVTAT ANLAAATLAA
PASVTARAFT EAADMVAPYL QEIGIELTGV PPLRAAIAER YCARGLPTDV DEIMVTTGAL
HAISLILATY TQPDDRVLVE QPTYHGALAA MASRGLRPVP VAMAPDGWEL DAVEAAIRQL
APELAYLIPD NQNPTGMTMP VGDRARLARI ISETKTRTII DETITDMWLD EQVPPPLATE
VTSRPDLVMT VGSMSKSFWG GLRIGWIRAE RSTLATIATL RPAIDMGTPI VEQLAAARLL
AADEEVLPER RDILRSRRAL LLRLLAEHLP DWQPVPGKGG MSVWVRLPAP MSSALSAAAS
RMGLEIPPGP RFGVDGTLER FIRVPYTLPD AQLVEAIELL ARAWRSVTGL TAPEPATVVV