Gene Mflv_3998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3998 
Symbol 
ID4975313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4253953 
End bp4254615 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID640458225 
Producttwo component transcriptional regulator 
Protein accessionYP_001135257 
Protein GI145224579 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.278973 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.137181 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCAGCCG TCCTGATCGC CGAGGACGAG CCTCGCATCT CGGCGCTTGT CCGAAAAGGG 
CTGTCCGCCA ACGGCTTCTC TGTCACTGTG GTGCCCGACG GCCCGTCGGC CTATGCGTAT
GCGCACAGCG GCGCCTTCGA TCTGATGGTG CTCGACACCG GACTTCCCGG TATGGACGGC
CTCTCCGTGT TGCGGCGGCT GCGGGCGGAG GGCAGTGCGC TGCCGGTGAT CGTGTTGACC
ACGCGAACCA CCGGCGCGGA CACCGCCGCG CTCCTCGGCG GCGCCGACGA CGTGATCGCC
AAACCGTTCC GCCTGGAGGA TCTGGTGTCG CGCGTGCGGA CGCGGCTGTC CCCCGGGCGG
GCGGCCAGGA CTCACACGCT GTCCTACGGG AATCTGCGGC TGGACCTTCG GACCCGCCGG
GCGCACGTGG GTGACTACTC GGTCGATCTG TCCGCGCGCG AGTTCGCGCT GGCCGAGATG
TTCCTCCGGC ACCCTGGTCA GGTGCTGACG CGCGATCAGC TGCTTCGCCA GGTGTGGGGC
AACGACTACG AACCTGGCTC GAACGTCGTC GACGTCTACG TCCGGTACCT GCGACGGAAG
TTGGGCGCCC GGCGCTTCGT CACGCTTCGG GGCATGGGGT ATCGCCTCGA GGCCGTGCAT
TAG
 
Protein sequence
MAAVLIAEDE PRISALVRKG LSANGFSVTV VPDGPSAYAY AHSGAFDLMV LDTGLPGMDG 
LSVLRRLRAE GSALPVIVLT TRTTGADTAA LLGGADDVIA KPFRLEDLVS RVRTRLSPGR
AARTHTLSYG NLRLDLRTRR AHVGDYSVDL SAREFALAEM FLRHPGQVLT RDQLLRQVWG
NDYEPGSNVV DVYVRYLRRK LGARRFVTLR GMGYRLEAVH