More than 300 homologs were found in PanDaTox collection
for query gene Mflv_3998 on replicon NC_009338
Organism: Mycobacterium gilvum PYR-GCK



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009338  Mflv_3998  two component transcriptional regulator  100 
 
 
220 aa  434  1e-121  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.278973  normal  0.137181 
 
 
-
 
NC_008726  Mvan_2389  two component transcriptional regulator  73.18 
 
 
219 aa  313  1.9999999999999998e-84  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.753035  normal  0.0318145 
 
 
-
 
NC_013159  Svir_31270  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  69.27 
 
 
221 aa  302  2.0000000000000002e-81  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.014564  normal  0.249814 
 
 
-
 
NC_013757  Gobs_4693  two component transcriptional regulator, winged helix family  66.67 
 
 
220 aa  278  7e-74  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_1330  response regulator receiver  60.83 
 
 
219 aa  257  9e-68  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2802  two component transcriptional regulator, winged helix family  62.56 
 
 
220 aa  249  2e-65  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.232869  normal 
 
 
-
 
NC_012669  Bcav_3167  two component transcriptional regulator, winged helix family  63.3 
 
 
218 aa  243  9.999999999999999e-64  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.436774  normal  0.0676898 
 
 
-
 
NC_014210  Ndas_4793  two component transcriptional regulator, winged helix family  58.53 
 
 
219 aa  243  1.9999999999999999e-63  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.732153 
 
 
-
 
NC_009921  Franean1_5704  two component transcriptional regulator  62.96 
 
 
220 aa  237  8e-62  Frankia sp. EAN1pec  Bacteria  normal  0.0158381  normal 
 
 
-
 
NC_011884  Cyan7425_1566  two component transcriptional regulator, winged helix family  55.61 
 
 
228 aa  236  2e-61  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00435599 
 
 
-
 
NC_007413  Ava_2440  two component transcriptional regulator  53.18 
 
 
222 aa  230  1e-59  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0936231  normal 
 
 
-
 
NC_013441  Gbro_4258  response regulator receiver  54.55 
 
 
220 aa  229  2e-59  Gordonia bronchialis DSM 43247  Bacteria  normal  0.0567705  n/a   
 
 
-
 
NC_008699  Noca_2006  response regulator receiver  57.01 
 
 
223 aa  221  4.9999999999999996e-57  Nocardioides sp. JS614  Bacteria  normal  0.379718  n/a   
 
 
-
 
NC_014151  Cfla_2685  two component transcriptional regulator, winged helix family  60.27 
 
 
224 aa  216  2e-55  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_2344  two component transcriptional regulator, winged helix family  53.57 
 
 
227 aa  213  1.9999999999999998e-54  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4935  two component transcriptional regulator, winged helix family  58.18 
 
 
221 aa  211  4.9999999999999996e-54  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_02960  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  52.47 
 
 
229 aa  206  2e-52  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013169  Ksed_21520  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  48.42 
 
 
222 aa  197  1.0000000000000001e-49  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0794896  hitchhiker  0.0000630157 
 
 
-
 
NC_013947  Snas_4900  two component transcriptional regulator, winged helix family  51.14 
 
 
221 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.196174  normal 
 
 
-
 
NC_011726  PCC8801_3524  two component transcriptional regulator, winged helix family  47.53 
 
 
223 aa  196  2.0000000000000003e-49  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2593  two component transcriptional regulator, winged helix family  47.53 
 
 
223 aa  196  2.0000000000000003e-49  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_2869  two component transcriptional regulator, winged helix family  51.58 
 
 
232 aa  194  1e-48  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_014210  Ndas_4549  two component transcriptional regulator, winged helix family  50.7 
 
 
221 aa  194  1e-48  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.703481  normal 
 
 
-
 
NC_013739  Cwoe_0293  two component transcriptional regulator, winged helix family  49.09 
 
 
226 aa  186  2e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.591061  normal  0.658536 
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  46.85 
 
 
224 aa  181  7e-45  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal 
 
 
-
 
NC_007413  Ava_0615  two component transcriptional regulator  43.18 
 
 
228 aa  179  2.9999999999999997e-44  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0841359  normal  0.719107 
 
 
-
 
NC_014165  Tbis_0707  winged helix family two component transcriptional regulator  43.5 
 
 
222 aa  179  2.9999999999999997e-44  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1351  two component transcriptional regulator, winged helix family  45.05 
 
 
225 aa  178  4.999999999999999e-44  Chloroflexus aggregans DSM 9485  Bacteria  hitchhiker  0.00188361  unclonable  0.0000000206018 
 
 
-
 
NC_013595  Sros_1333  response regulator receiver protein  43.5 
 
 
222 aa  178  7e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  0.40527  normal  0.1595 
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  45.95 
 
 
224 aa  177  1e-43  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4122  two component transcriptional regulator, winged helix family  42.15 
 
 
223 aa  176  2e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_2799  two component transcriptional regulator  44.84 
 
 
236 aa  175  5e-43  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000368356  n/a   
 
 
-
 
NC_013131  Caci_0835  two component transcriptional regulator, winged helix family  45.33 
 
 
222 aa  174  6e-43  Catenulispora acidiphila DSM 44928  Bacteria  normal  hitchhiker  0.0000000540746 
 
 
-
 
NC_011884  Cyan7425_3411  two component transcriptional regulator, winged helix family  42.73 
 
 
224 aa  174  7e-43  Cyanothece sp. PCC 7425  Bacteria  normal  0.591115  normal 
 
 
-
 
NC_009997  Sbal195_0632  two component transcriptional regulator  41.89 
 
 
227 aa  172  5e-42  Shewanella baltica OS195  Bacteria  normal  0.157641  normal 
 
 
-
 
NC_009665  Shew185_0604  two component transcriptional regulator  41.89 
 
 
227 aa  172  5e-42  Shewanella baltica OS185  Bacteria  decreased coverage  0.00704602  n/a   
 
 
-
 
NC_013131  Caci_0904  two component transcriptional regulator, winged helix family  45.02 
 
 
254 aa  171  5.999999999999999e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.936287  normal  0.32173 
 
 
-
 
NC_011729  PCC7424_2242  two component transcriptional regulator, winged helix family  40.91 
 
 
224 aa  170  1e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.415885 
 
 
-
 
NC_014248  Aazo_0389  winged helix family two component transcriptional regulator  41.89 
 
 
224 aa  167  1e-40  'Nostoc azollae' 0708  Bacteria  normal  0.667669  n/a   
 
 
-
 
NC_009921  Franean1_3859  two component transcriptional regulator  44.95 
 
 
235 aa  166  2e-40  Frankia sp. EAN1pec  Bacteria  normal  0.0389848  normal 
 
 
-
 
NC_007413  Ava_3453  two component transcriptional regulator  41.28 
 
 
224 aa  167  2e-40  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0187  two component transcriptional regulator  45.66 
 
 
227 aa  166  2e-40  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_10613  two component system DNA binding transcriptional regulatory protein tcrA  44.5 
 
 
253 aa  166  2.9999999999999998e-40  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.0000000499525  normal  0.750249 
 
 
-
 
NC_010003  Pmob_0851  two component transcriptional regulator  37.16 
 
 
222 aa  166  2.9999999999999998e-40  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  43.89 
 
 
227 aa  166  2.9999999999999998e-40  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_013093  Amir_6380  two component transcriptional regulator, winged helix family  43.24 
 
 
223 aa  166  2.9999999999999998e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  0.654273  n/a   
 
 
-
 
NC_011772  BCG9842_B2033  DNA-binding response regulator  39.45 
 
 
224 aa  166  4e-40  Bacillus cereus G9842  Bacteria  normal  0.725953  normal 
 
 
-
 
NC_007298  Daro_2474  heavy metal response regulator  42.92 
 
 
223 aa  165  5e-40  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A3221  DNA-binding response regulator  39.45 
 
 
224 aa  164  6.9999999999999995e-40  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2549  response regulator receiver  40.89 
 
 
222 aa  163  1.0000000000000001e-39  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2944  two component transcriptional regulator  39.45 
 
 
224 aa  164  1.0000000000000001e-39  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0958095  n/a   
 
 
-
 
NC_010681  Bphyt_3267  two component transcriptional regulator, winged helix family  44.81 
 
 
220 aa  163  2.0000000000000002e-39  Burkholderia phytofirmans PsJN  Bacteria  normal  0.387524  normal 
 
 
-
 
NC_011138  MADE_03339  Response regulator consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain  39.27 
 
 
226 aa  162  3e-39  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3846  two component transcriptional regulator, winged helix family  40.81 
 
 
222 aa  162  5.0000000000000005e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0015  two component transcriptional regulator  39.91 
 
 
228 aa  162  5.0000000000000005e-39  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_3235  DNA-binding response regulator  38.53 
 
 
224 aa  161  6e-39  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_007951  Bxe_A0699  two component transcriptional regulator  45.28 
 
 
220 aa  161  7e-39  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_0998  two component transcriptional regulator, winged helix family  38.12 
 
 
223 aa  161  8.000000000000001e-39  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_2401  two component transcriptional regulator  44.04 
 
 
283 aa  161  9e-39  Frankia sp. CcI3  Bacteria  normal  0.0476592  normal  0.0197415 
 
 
-
 
NC_007005  Psyr_1497  heavy metal response regulator  40.99 
 
 
228 aa  160  1e-38  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_0243  two component transcriptional regulator, winged helix family  36.99 
 
 
224 aa  160  1e-38  Geobacter bemidjiensis Bem  Bacteria  hitchhiker  0.000226454  n/a   
 
 
-
 
NC_007644  Moth_1478  two component transcriptional regulator  39.45 
 
 
240 aa  160  1e-38  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000111909  normal 
 
 
-
 
NC_005945  BAS2056  DNA-binding response regulator  38.12 
 
 
227 aa  160  2e-38  Bacillus anthracis str. Sterne  Bacteria  normal  0.413172  n/a   
 
 
-
 
NC_007298  Daro_2815  response regulator receiver:transcriptional regulatory protein, C-terminal  42.06 
 
 
218 aa  160  2e-38  Dechloromonas aromatica RCB  Bacteria  normal  0.877458  normal 
 
 
-
 
NC_007517  Gmet_3383  two component transcriptional regulator  36.99 
 
 
224 aa  160  2e-38  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_2212  DNA-binding response regulator  38.12 
 
 
227 aa  160  2e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_007794  Saro_2066  two component transcriptional regulator  37.21 
 
 
225 aa  159  2e-38  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_2240  DNA-binding response regulator  38.12 
 
 
227 aa  160  2e-38  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  2.85177e-28 
 
 
-
 
NC_010322  PputGB1_0019  two component heavy metal response transcriptional regulator  40.91 
 
 
225 aa  159  3e-38  Pseudomonas putida GB-1  Bacteria  normal  0.593373  normal 
 
 
-
 
NC_010501  PputW619_0017  two component heavy metal response transcriptional regulator  40.91 
 
 
225 aa  159  3e-38  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A2194  DNA-binding response regulator  38.12 
 
 
227 aa  159  3e-38  Bacillus cereus B4264  Bacteria  hitchhiker  0.00702475  n/a   
 
 
-
 
NC_009512  Pput_0017  two component heavy metal response transcriptional regulator  40.91 
 
 
225 aa  159  3e-38  Pseudomonas putida F1  Bacteria  normal  normal  0.0468746 
 
 
-
 
NC_013124  Afer_0703  two component transcriptional regulator, winged helix family  39.27 
 
 
236 aa  159  3e-38  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_010571  Oter_1727  two component transcriptional regulator  42.01 
 
 
228 aa  159  4e-38  Opitutus terrae PB90-1  Bacteria  normal  0.284746  normal 
 
 
-
 
NC_008609  Ppro_2957  two component transcriptional regulator  37.16 
 
 
223 aa  159  4e-38  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000000406961  n/a   
 
 
-
 
NC_002939  GSU0451  DNA-binding response regulator  36.99 
 
 
224 aa  158  5e-38  Geobacter sulfurreducens PCA  Bacteria  normal  0.313098  n/a   
 
 
-
 
NC_005945  BAS2999  DNA-binding response regulator  38.07 
 
 
224 aa  159  5e-38  Bacillus anthracis str. Sterne  Bacteria  normal  0.227145  n/a   
 
 
-
 
NC_007530  GBAA_3229  DNA-binding response regulator  38.07 
 
 
224 aa  159  5e-38  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_3002  two component transcriptional regulator  39.91 
 
 
230 aa  158  6e-38  Acidovorax citrulli AAC00-1  Bacteria  normal  0.67465  normal  0.369251 
 
 
-
 
NC_009511  Swit_3444  two component transcriptional regulator  37.67 
 
 
220 aa  158  8e-38  Sphingomonas wittichii RW1  Bacteria  normal  0.112849  normal  0.384843 
 
 
-
 
NC_008048  Sala_0801  two component transcriptional regulator  37.21 
 
 
221 aa  157  9e-38  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal  0.0203691 
 
 
-
 
NC_008463  PA14_27810  putative two-component response regulator  41.82 
 
 
226 aa  157  9e-38  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_37500  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  40.83 
 
 
225 aa  157  1e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0213695  normal 
 
 
-
 
NC_013525  Tter_1098  two component transcriptional regulator, winged helix family  41.74 
 
 
228 aa  157  1e-37  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012918  GM21_0227  two component transcriptional regulator, winged helix family  36.53 
 
 
224 aa  157  1e-37  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_4293  two component transcriptional regulator  36.53 
 
 
224 aa  157  1e-37  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.0000000000934276  n/a   
 
 
-
 
NC_009092  Shew_3258  two component heavy metal response transcriptional regulator  37.1 
 
 
238 aa  157  1e-37  Shewanella loihica PV-4  Bacteria  hitchhiker  0.00206307  normal  0.0675777 
 
 
-
 
NC_008699  Noca_1613  response regulator receiver  42.2 
 
 
225 aa  157  1e-37  Nocardioides sp. JS614  Bacteria  normal  0.97266  n/a   
 
 
-
 
NC_013061  Phep_1345  response regulator receiver  35.24 
 
 
227 aa  157  2e-37  Pedobacter heparinus DSM 2366  Bacteria  normal  normal  0.71904 
 
 
-
 
NC_011729  PCC7424_4284  two component transcriptional regulator, winged helix family  39.27 
 
 
227 aa  157  2e-37  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_014248  Aazo_2223  winged helix family two component transcriptional regulator  40.28 
 
 
229 aa  157  2e-37  'Nostoc azollae' 0708  Bacteria  normal  0.335669  n/a   
 
 
-
 
NC_010501  PputW619_5178  two component heavy metal response transcriptional regulator  39.01 
 
 
225 aa  156  2e-37  Pseudomonas putida W619  Bacteria  normal  0.341313  normal 
 
 
-
 
NC_011884  Cyan7425_2941  multi-component transcriptional regulator, winged helix family  38.53 
 
 
652 aa  156  2e-37  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_009656  PSPA7_2348  putative two-component response regulator  41.36 
 
 
228 aa  156  2e-37  Pseudomonas aeruginosa PA7  Bacteria  normal  0.804247  n/a   
 
 
-
 
NC_007404  Tbd_1749  two component heavy metal response transcriptional regulator  43.18 
 
 
242 aa  155  3e-37  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_007604  Synpcc7942_1873  two component transcriptional regulator  38.89 
 
 
226 aa  155  3e-37  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_1594  response regulator receiver  45.33 
 
 
219 aa  156  3e-37  Salinispora tropica CNB-440  Bacteria  normal  0.349405  normal 
 
 
-
 
NC_007498  Pcar_3081  two component signal transduction response regulator  35.16 
 
 
223 aa  155  5.0000000000000005e-37  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  35.71 
 
 
238 aa  155  6e-37  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1461  two component heavy metal response transcriptional regulator  42.53 
 
 
227 aa  155  6e-37  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
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