Gene Mflv_3925 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3925 
Symbol 
ID4975240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4186978 
End bp4188186 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content73% 
IMG OID640458152 
Product(Uracil-5)-methyltransferase 
Protein accessionYP_001135184 
Protein GI145224506 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0169441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.531349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACGACAGTGC CGAGGAACTG ACCCTGACGA CAGTGGCGCC GGCCAACGGC 
GGGAGCTGCA TCGCCCGCCA CGACGCGCGG GTGGTGTTCG TGCGCTACGC GCTGCCGGGT
GAGACGGTGC GCGCGCGTCT GGTCGGTGAC CGTGGCTCGT ACCTCAACGC CGAGGCCGTC
GAGGTGCTCG AGTCGTCTGC CGACCGGATC GACCCGCTGT GCCCGATCGC GGGCGCCGAC
GGGGCGGGCT GCTGTGACCT CGCATTCGCC GAGCCCGCGG CGGTGCGCCG GATCAAGGGC
GAGGTGGTCG CCAATCAGCT TGCCCGCCTT GGGGGTTTGC AGTGGCGCGA CGAAGCCGAG
GCGACCGCCG AGCCGGTCGG TGACGGGGCA GCGACGGGGT GGCGGACCCG TGTGCGGCTC
GACACGTCGG ACGACGGGCG GGTGGGTTTT CATCGCTACC ACAGCGGCGA GCTGGTGCAC
CGCCTGGATT GTGCGCAGCT GCCCGCCGGA ATGGTCGACG GGTTGGCCGA CATGCGGTGG
GCACCGGGGT CGGCGGTGCA CGTCGTGCTC GACGGCGACG GCAACCGCCA TGTGGTGGTG
GCCGCCGGAC GCGACCGGGG TGTGCGCACG ACGGTCGTCG AGGGCGACTA CGAGACCGTG
CAGCGCGTCG CGGGACGGTC CTGGCGCGTG CCGGCGACCG CGTTCTGGCA GGCGCACCGC
GCCGCGCCGG AGCTCTACAG CGCGCTGGTC ACGCGGTGGG CGCAGCTGGA GCTGGGGATG
TCGGCGTGGG ATCTCTACGG TGGCGCAGGG GTTTTCGCGG CCGCGCTGGC CGCGGGGGTC
GGTCCGGACG GCAGCGTGCT CACCGTGGAC ACCTCCCGCG GGGCATCGCG GTCGGCCCGG
GCCGCGCTGG GCGACCTCGG CAACGTCACG GTGGTGACGG ACTCGGTGCG GCGCGCGCTG
GGTGCGCAGC GCGAGCGGGC CGATGTCGCG GTACTCGATC CGCCGCGCAC CGGTGCGGGC
CGCGAGGTCA TCGATCTGCT CGCCGGCGCC GGGGTGCCCA GGATCATCCA CATCGGTTGC
GAGGCCGCGT CGTTCGCGCG TGACGTCGGG CTCTATCGCA CACACGGCTA CGCGGTCGAG
GAGCTGCAGG TCTACGACTC GTTCCCGCTG ACCCACCACG TCGAGTGCGT GGCGGTGCTG
TCCCGGTGA
 
Protein sequence
MSADDSAEEL TLTTVAPANG GSCIARHDAR VVFVRYALPG ETVRARLVGD RGSYLNAEAV 
EVLESSADRI DPLCPIAGAD GAGCCDLAFA EPAAVRRIKG EVVANQLARL GGLQWRDEAE
ATAEPVGDGA ATGWRTRVRL DTSDDGRVGF HRYHSGELVH RLDCAQLPAG MVDGLADMRW
APGSAVHVVL DGDGNRHVVV AAGRDRGVRT TVVEGDYETV QRVAGRSWRV PATAFWQAHR
AAPELYSALV TRWAQLELGM SAWDLYGGAG VFAAALAAGV GPDGSVLTVD TSRGASRSAR
AALGDLGNVT VVTDSVRRAL GAQRERADVA VLDPPRTGAG REVIDLLAGA GVPRIIHIGC
EAASFARDVG LYRTHGYAVE ELQVYDSFPL THHVECVAVL SR