| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_3822 |
|---|
| Symbol | |
|---|
| ID | 4975138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 4084065 |
|---|
| End bp | 4085141 |
|---|
| Gene Length | 1077 bp |
|---|
| Protein Length | 358 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640458046 |
|---|
| Product | diguanylate cyclase |
|---|
| Protein accession | YP_001135082 |
|---|
| Protein GI | 145224404 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.36093 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCGAA TTCGCCAGCG GTGGGCGCAG CCCGACCATT ACCACTGGCT GTCGGGGTAC
CTCGGCGACC GGAATCTGCA GGGCTTCACA CGCCGCATGA TGGGCCTCAT CAACCTCGTG
CTCGCGATCG TTCCGGCCCT GATGGTGCTC AGTCCTTCCG GCCCCGACAC CGGCTTCGGC
GTGGCGGCCG GCCTCGTCGT GTCCGTGCTC TGCGCGCTGA TGGCCGGGGT GTGGTTTCTG
CACTGGCCCA CCAGAGCCGA GTCGATCGCG TTCTCGATCC TGTCCAACAT CAGCATCGCC
GTCGTGGCCC TCTCGTGGCC GGACCCACTG ACCGGACTGC TCGGCTGTAT CACGTTCGCG
GCGCTCGCCG GCTATGTGGC GTTCTTCCAC TCCAGCCACT ACCTGGTGAT GGTGCTCGCG
ACAGCCGCGG GGGTGGCGAT CATCTGCACC GCCGACATCA CGGCCGGCGG GGACGCCTAC
CTGGCCGCGG TCGCATTCAT GATGATCGCC GTCGCCGTGC TGGCCGTGCC GTTCTCCGCC
CAGGTCCTCG TGCATCTGCT CGGGGACGAC GCCCTGCACT CGCACACCGA CCCGCTGACG
GGACTGCGCA ACCGCCGCGG CTTCTACCGG TCGGTGCGCC GCCTTCTCAG AGCCGCACCC
GACCGGGATC TGAACTTCCT GACCGTGGCG ATGATCGACC TGGACCGCTT CAAACAGATC
AATGACACCC GCGGCCACGC CACCGGTGAC CGCCTGCTCG TCAGCATCAG CGGGTGCCTG
TGCCACTGCG CCCGCGGCGA GGCCGTCGTG GGCCGGGTCG GGGGTGAGGA GTTCCTGATC
GCCGAGGCCA CCCGCGACGA CGACGCCGAG GCTCTGGCCG AGAGGCTGCG ACTGGCGATC
GCATCGACGT CGTGGGGCAT CACGGCCAGT GTCGGTGTCG CCTGTCGCCG GCTGAACGGG
GACGCCGACA CCCGGGAGCT TCTCGGCGAC CTGATCGAGG CCGCCGACTC CGCGATGTAC
GAGGCCAAAC GGTCCGGCGG CAACCAGTAT CGGCGCGCCC GCGAGTCGGC GGCCTGA
|
|---|
| Protein sequence | MSRIRQRWAQ PDHYHWLSGY LGDRNLQGFT RRMMGLINLV LAIVPALMVL SPSGPDTGFG
VAAGLVVSVL CALMAGVWFL HWPTRAESIA FSILSNISIA VVALSWPDPL TGLLGCITFA
ALAGYVAFFH SSHYLVMVLA TAAGVAIICT ADITAGGDAY LAAVAFMMIA VAVLAVPFSA
QVLVHLLGDD ALHSHTDPLT GLRNRRGFYR SVRRLLRAAP DRDLNFLTVA MIDLDRFKQI
NDTRGHATGD RLLVSISGCL CHCARGEAVV GRVGGEEFLI AEATRDDDAE ALAERLRLAI
ASTSWGITAS VGVACRRLNG DADTRELLGD LIEAADSAMY EAKRSGGNQY RRARESAA
|
|---|
| |