Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3760 |
Symbol | aroE |
ID | 4975076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 4009861 |
End bp | 4010688 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 640457984 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_001135020 |
Protein GI | 145224342 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase [TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.321909 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCCTCGA CTCCGGCCGC TGATCGGCCC CGGCGGGCCG CGGTCCTGGG CTCGCCGATC GCGCATTCAC GCTCCCCGCA GCTGCACCTG GCGGCCTACG CGGCGCTGGG GCTGAGCAGC TGGCGGTACG ACCGCATCGA GTGCGGCGAG GACGAGCTGC CCGGCTTCGT CGCCGGTCTC GGAGACGAAT GGGTGGGGCT CTCGGTGACC ATGCCCGGCA AGTTCGCGGC GCTGCGCTGC GCCGACGAGG CCACCGAGCG AGCCAGGCTG GTGGGTTCGG CGAACACCCT GGTGCACACG GCGACCGGCT GGCGCGCCGA CAACACCGAC ATCGACGGGG TGGCGGGCGC GCTCGCCGAC GCCGGAGTGT CCGGATCCGC GGTCGTCGTG GGGTCGGGCG GGACGGCGCC GGCGGTGGTG GCAGGCCTGG TCCAGCTCGG CGCGCACCAC GTCACGGTCG TCGCCCGCAA CGCGGAGAAG GCCCAGGGAC TGGTGGCGCT GGGGCGACGG TGCGGTGCCA CCACCGAGTG GGTCGATCTG ACCGGCGACG ACGTGACCGG CGCCGTCGCT GCCGCGGACG TCGTGGTCAA CACGGTCCCC GCCGACGCGG TCGCACCCTA TGCGCCGCGG CTGGCCGGAA CGCCGGTGCT GCTGGACGCG ATCTACGATC CGTGGCCCAC ACCGCTGGCC GCGGCCGTGA CCGCCGCCGG CGGACGCGTC ATCAGCGGCC TGGAGATGCT GCTGAACCAG GCCTTCGCCC AGGTCGAACA GTTCACCGGG ATGCCCGCGC CGCAGAAAGC GATGCGGGGG GCCCTGGGTC TGGCTTAG
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Protein sequence | MSSTPAADRP RRAAVLGSPI AHSRSPQLHL AAYAALGLSS WRYDRIECGE DELPGFVAGL GDEWVGLSVT MPGKFAALRC ADEATERARL VGSANTLVHT ATGWRADNTD IDGVAGALAD AGVSGSAVVV GSGGTAPAVV AGLVQLGAHH VTVVARNAEK AQGLVALGRR CGATTEWVDL TGDDVTGAVA AADVVVNTVP ADAVAPYAPR LAGTPVLLDA IYDPWPTPLA AAVTAAGGRV ISGLEMLLNQ AFAQVEQFTG MPAPQKAMRG ALGLA
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