Gene Mflv_3760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3760 
SymbolaroE 
ID4975076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp4009861 
End bp4010688 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content74% 
IMG OID640457984 
Productshikimate 5-dehydrogenase 
Protein accessionYP_001135020 
Protein GI145224342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0169] Shikimate 5-dehydrogenase 
TIGRFAM ID[TIGR00507] shikimate 5-dehydrogenase
[TIGR01809] shikimate-5-dehydrogenase, fungal AROM-type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.321909 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTCGA CTCCGGCCGC TGATCGGCCC CGGCGGGCCG CGGTCCTGGG CTCGCCGATC 
GCGCATTCAC GCTCCCCGCA GCTGCACCTG GCGGCCTACG CGGCGCTGGG GCTGAGCAGC
TGGCGGTACG ACCGCATCGA GTGCGGCGAG GACGAGCTGC CCGGCTTCGT CGCCGGTCTC
GGAGACGAAT GGGTGGGGCT CTCGGTGACC ATGCCCGGCA AGTTCGCGGC GCTGCGCTGC
GCCGACGAGG CCACCGAGCG AGCCAGGCTG GTGGGTTCGG CGAACACCCT GGTGCACACG
GCGACCGGCT GGCGCGCCGA CAACACCGAC ATCGACGGGG TGGCGGGCGC GCTCGCCGAC
GCCGGAGTGT CCGGATCCGC GGTCGTCGTG GGGTCGGGCG GGACGGCGCC GGCGGTGGTG
GCAGGCCTGG TCCAGCTCGG CGCGCACCAC GTCACGGTCG TCGCCCGCAA CGCGGAGAAG
GCCCAGGGAC TGGTGGCGCT GGGGCGACGG TGCGGTGCCA CCACCGAGTG GGTCGATCTG
ACCGGCGACG ACGTGACCGG CGCCGTCGCT GCCGCGGACG TCGTGGTCAA CACGGTCCCC
GCCGACGCGG TCGCACCCTA TGCGCCGCGG CTGGCCGGAA CGCCGGTGCT GCTGGACGCG
ATCTACGATC CGTGGCCCAC ACCGCTGGCC GCGGCCGTGA CCGCCGCCGG CGGACGCGTC
ATCAGCGGCC TGGAGATGCT GCTGAACCAG GCCTTCGCCC AGGTCGAACA GTTCACCGGG
ATGCCCGCGC CGCAGAAAGC GATGCGGGGG GCCCTGGGTC TGGCTTAG
 
Protein sequence
MSSTPAADRP RRAAVLGSPI AHSRSPQLHL AAYAALGLSS WRYDRIECGE DELPGFVAGL 
GDEWVGLSVT MPGKFAALRC ADEATERARL VGSANTLVHT ATGWRADNTD IDGVAGALAD
AGVSGSAVVV GSGGTAPAVV AGLVQLGAHH VTVVARNAEK AQGLVALGRR CGATTEWVDL
TGDDVTGAVA AADVVVNTVP ADAVAPYAPR LAGTPVLLDA IYDPWPTPLA AAVTAAGGRV
ISGLEMLLNQ AFAQVEQFTG MPAPQKAMRG ALGLA