Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mflv_3728 |
Symbol | |
ID | 4975044 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium gilvum PYR-GCK |
Kingdom | Bacteria |
Replicon accession | NC_009338 |
Strand | - |
Start bp | 3976479 |
End bp | 3977156 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640457952 |
Product | ribulose-phosphate 3-epimerase |
Protein accession | YP_001134988 |
Protein GI | 145224310 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0237656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0198075 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC CGCTGATCGC ACCGTCGATC CTGGCCGCCG ACTTCGCCAG GCTCGCCGAG GAGGCCGCCG CAGTCGACGG CGCCGACTGG CTGCACGTCG ACGTCATGGA CAACCACTTC GTGCCGAATC TCACGCTCGG CCTGCCGGTG GTGGAATCAC TGCTGAAGGT CACCGACATC CCGATGGACT GCCATCTGAT GATCGAGAAC CCCGAGCGGT GGGCGCCGCC GTACGCCGAG GCGGGCGCCT ACAACGTGAC GATCCATGCC GAGGCCACCG ACAATCCGGT CGCGGTCGCC CGCGACATCC GCGCCGCCGG CGCCAAGGCC GGCCTGTCCA TCAAGCCGGG GACGCCGATC GAGCCGTATC TGGAGATCCT GCGCGAGTTC GACACGCTTC TGGTGATGTC GGTCGAGCCG GGCTTCGGCG GCCAGAAGTT CATCGCCGAG GTGCTGCCGA AGGTCGGAAT CGCGCGCCGG TTGGTCGATT CCGGCGAGTT GACCATCGTC ATCGAGATCG ACGGCGGCAT CAACGCCGAC ACCATCGAGG AGGCCGCCGA AGCCGGTGTC GACTGCTTCG TCGCGGGCTC GGCGGTCTAC AGCGCCGAGG ATCCGGCCGC CGCAGTGCAG TCGCTGCGCA GCCAGGCTGC CGCGGCATCG CGTCATCTGG TCCTGTGA
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Protein sequence | MPKPLIAPSI LAADFARLAE EAAAVDGADW LHVDVMDNHF VPNLTLGLPV VESLLKVTDI PMDCHLMIEN PERWAPPYAE AGAYNVTIHA EATDNPVAVA RDIRAAGAKA GLSIKPGTPI EPYLEILREF DTLLVMSVEP GFGGQKFIAE VLPKVGIARR LVDSGELTIV IEIDGGINAD TIEEAAEAGV DCFVAGSAVY SAEDPAAAVQ SLRSQAAAAS RHLVL
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