Gene Mflv_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3642 
Symbol 
ID4974960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3887341 
End bp3888708 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content72% 
IMG OID640457868 
ProductDNA polymerase IV 
Protein accessionYP_001134904 
Protein GI145224226 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.370553 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGCTC GATGGGTCCT TCACCTGGAC ATGGACGCGT TCTTCGCGTC GGTGGAGCAG 
CTGACCCGTC CGACGCTGCG GGGCCGGCCG GTTCTGGTCG GCGGCCTCGG GGGCCGCGGC
GTGGTGGCCG GAGCGAGCTA CGAGTCCCGG GTCTTCGGCG CGCGGTCGGC GATGCCGATG
CATCAGGCCC GTCGCCTCGT CGGTGCCGGC GCGGTGGTCC TGCCGCCGCG CGGTGTGGTC
TACGGGTTGG CGAGCCGCCG GGTGTTCGAG ACGGTGCGTG CGAGAGTGCC GGTGCTCGAA
CAGCTTTCCT TCGACGAGGC GTTCGGTGAA CCTGTCGCAC TCGCCGGCGC GTCGGCCGGT
GAGGTGGCGG ATTTCTGTCA GGCGTTACGT GCCGAGGTGA CCGCGGTGAC CGGACTGGTC
GCCTCGGTCG GCGCCGGGTC GGGCAAGCAG ATCGCCAAGA TCGCGTCGGG ACTCGCGAAG
CCCGACGGCG TGACGGTGAT CGCGCACGCT GACGAGCGGG CGCTGCTCGA CGACCTTCCG
GTCCGGCGGT TGTGGGGCAT CGGCCCGGTG GCCGAGGAGA AACTGCACCG CCTGGGCATC
GACACCATCG GCGGGTTCGC GGCGCTGGCG GACACCGAGG TGGCCAACAT CCTGGGTCCG
ACCGTCGGGC CCGCGCTGCA CCGGCTGGCC CGCGGGATCG ACGACCGGCC GGTCACCGAG
AACGCGCCGG CCAAACAGAT CAGCGCGGAG TCGACGTTCC CCGAGGACCT CACGACGCTG
CGGCAGCTCC GGGATGCGGC GGCCCCGATC GGGGAGCACG CCCACCGCAG GTTGCTCAAG
GACGGCCGCG GGGCGCGCAC AGTGACGGTC AAGCTGAAGA AATCCGACAT GAGCACGCTG
ACCAGATCGG CGACGCTGCC GTACGCGACG ACCGACGCGG GCACGCTGAT CGCGACCGCG
CACCGGCTCC TCCTCGATCC TGTGGACATC GGCCCGATCC GCCTCGTCGG TATCGGCTTC
TCGGGCCTGT CGGACATCCA GCAGGAGTCG CTGTTCCCGG AGCTGGAATC GGCGACGACC
GAGGAGCTGA CCAGCCTGGG CCCGTTGTCC TCCCCGCTGT CGTCCGCGGC GTCCCACGTC
GAACCCGCAT GGCGCGTCGG TGACGACGTC TCCCACACGG AGTTCGGGCA CGGCTGGGTG
CAGGGCGCCG GGCACGGCGT CATGACGGTG CGGTTCGAGA CCCGCGGCAC GGGGCCCGGC
CCCGCGCGCA CGTTCCGTGA GGACGACCCC GCCCTGTCAC GTGCCAACCC GGTCGACAGC
CTGGACTGGC CGGACTACGT CGCCGAGATG ACCCGGTCCG ACACCTGA
 
Protein sequence
MAARWVLHLD MDAFFASVEQ LTRPTLRGRP VLVGGLGGRG VVAGASYESR VFGARSAMPM 
HQARRLVGAG AVVLPPRGVV YGLASRRVFE TVRARVPVLE QLSFDEAFGE PVALAGASAG
EVADFCQALR AEVTAVTGLV ASVGAGSGKQ IAKIASGLAK PDGVTVIAHA DERALLDDLP
VRRLWGIGPV AEEKLHRLGI DTIGGFAALA DTEVANILGP TVGPALHRLA RGIDDRPVTE
NAPAKQISAE STFPEDLTTL RQLRDAAAPI GEHAHRRLLK DGRGARTVTV KLKKSDMSTL
TRSATLPYAT TDAGTLIATA HRLLLDPVDI GPIRLVGIGF SGLSDIQQES LFPELESATT
EELTSLGPLS SPLSSAASHV EPAWRVGDDV SHTEFGHGWV QGAGHGVMTV RFETRGTGPG
PARTFREDDP ALSRANPVDS LDWPDYVAEM TRSDT