Gene Mflv_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3135 
Symbol 
ID4974456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3319216 
End bp3320073 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content65% 
IMG OID640457358 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001134400 
Protein GI145223722 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.372706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGC AGGCCGGTGC CGCCCTGGCG ACCGCGGCGC AGCAGGATCC GGCCCCGAAA 
AAGGTTCGCA CCGGACCCAA TTGGGGCGAT CTGCTGCTGC GGGTCGCCGC GGGACTGGTA
CTGCTGTACC TGTTTCTGCC GATCTTCGTG ATCATCCTGT TCTCGTTCAA CAAGCCGGCA
GGAAAGTTCA ACTACTCCTG GCAGGGCTTC ACGCTGGACA ACTGGCTCGA CCCATTCAAG
TACCCGGCGC TGACCGAGGC GCTCAAACTC AGCCTGAACG TGGCCGCGGT GTCGACGGCG
GTCGCGCTGG TGCTCGGCAC TCTGGTCGCG ATCGCGCTCG TGCGGCAACG CTGGCGTGGG
CAGCGCGCGG TCGACACCTT CCTGATCCTG CCGTTGACGG CGCCCGAGGT GGTGATGGGT
GCGGCGCTGC TGACACTGTT CCTGGACTTC AACACCGCCG CCGGATACAC GACAATCGTG
TTGTCGCACA TCGCGTTCGA GGTCAGCTTC ATCGCGATGA CCGTCCGGGC GCGGGTGCGC
GGTTTCGACT GGACGTTGGA GGACGCGTCG CTGGATCTCG GCGCGAGCCC GACCCGCACG
TTCTTCAAGG TGACCCTGCC GCTGATCGTG CCCGGCATCG TGGCGGCGGC GATGCTGTCG
TTCGCGCTGT CTCTCGACGA CTTCATCATC ACGTACTTCG TCAGCGGCTC CGAGGTCACC
TATCCGCTGT ACGTCAACGC GGCGGTCAAG GCTGCGGTGC CGCCGCAGAT CAACGTGCTC
GCCACGGCGA TCCTCGTCGT GAGCCTTCTC CTCCTGGCGA TCGGAACGCT CTACCGCCGT
AAGAAGATCG ACATCTGA
 
Protein sequence
MTTQAGAALA TAAQQDPAPK KVRTGPNWGD LLLRVAAGLV LLYLFLPIFV IILFSFNKPA 
GKFNYSWQGF TLDNWLDPFK YPALTEALKL SLNVAAVSTA VALVLGTLVA IALVRQRWRG
QRAVDTFLIL PLTAPEVVMG AALLTLFLDF NTAAGYTTIV LSHIAFEVSF IAMTVRARVR
GFDWTLEDAS LDLGASPTRT FFKVTLPLIV PGIVAAAMLS FALSLDDFII TYFVSGSEVT
YPLYVNAAVK AAVPPQINVL ATAILVVSLL LLAIGTLYRR KKIDI