Gene Mflv_3121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_3121 
Symbol 
ID4974442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp3306135 
End bp3307364 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content70% 
IMG OID640457344 
Producttranscriptional regulator, CadC 
Protein accessionYP_001134386 
Protein GI145223708 
COG category[K] Transcription
[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
[COG3710] DNA-binding winged-HTH domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0116051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAGCG CTGACGCGCT TTCCTCCTCG CCTCGGGTAT GGCGCTGGGA CGACTACGTC 
CTCGATCTGG GGCGCTACGA ACTGCGCGCG GGCGACTCGG TGATCCGGGT CGAACCCCAG
GTGTTCGACG TGCTGACCCA GCTGGTGAGC CATCACGATC GGTGTGTCAG CAAGGAGGAG
TTGTTCGACA CCGTCTGGGG TGGCCGGTTC GTCGGGGAGG CGGCGCTCAC CAGCAGGATC
AAGGCCGTCC GTCGGGCTCT GGGCGACGAC GGGGAGGCGC AGCGCTACAT CCGCACCGTG
CGCGGCCGCG GCTATCGGTT CGTCGGCACG CTGCACGGCG AGGACTCCGC GACGCCCGAC
GAGGCGTCCG TCGAGCACGT GGTGCGTGAA ACGCCACGCC AGCACATCGC TTTCGCCCGC
GCGGCCGACG GGGTGCGGCT CGCCTACGCC GAGTCGGGCG ACGGGCCGCC GCTGGTGAAG
GCGGCCAACT GGATGACGCA CCTGGGTTAT GACAGCGAGA GTCCCGTCTG GCGGCACGGG
GTGCGGGAGA TGTCGTTGCG CTACAGGTTC ATTCGCTACG ACGAGCGCGG CTGCGGCCTG
TCGGACTGGG ACGTCGGCGA CTTCACCTTC GACGACTGGG TCGCCGACCT CGAGACAGTC
GTCGACGCGG TCGGACTGGA TCGGTTCCAC CTCATGGGGG TGTCGCAGGG CGGTGCGGTG
GCGGTGGCCT ACGCCGCACG GCATCCGGAC AAGGTGAGCC GTCTGGTGCT GTGCGGGGCC
TACGCGCGCG GGCGCGCGGT CCGGGCTCTC AGCGACGACG AGAAGCGCGC CGCCGCACTG
GATCTCGAGC TCGCCCGGGT GGGTTGGGGC CGCGACGATC CGGCGTTCCG ACAGGTGTTC
GCGGCGCAGT TCCTGCCGGA CGGGACGCGT GCGGACTGGG CGGCGTTCGA TCAGCTGCAG
CGGCGCACGA CGTCCCCGGA GAACGCGGTG CACTTCCTGG AGGAGTTCGC CCGCATCGAC
GTCCGGGACC TCTGCGCCCG GGTGCAGTGC CCGACGCTGG TGCTGCATTC CCGCGACGAC
CACCGCGTCC CGATGCGGTA CGGCGAGGAG TTGGCGTCGC TGATACCGGA TGCGCGGCTC
GTCGCGCTGT CGAGCAACAA CCATCTGCTG ACGGCGACCG AACCGGCGTG GCAGGTGTTC
TGCGCCGAGG TGGCGGCTTT TCTGGTGTGA
 
Protein sequence
MTSADALSSS PRVWRWDDYV LDLGRYELRA GDSVIRVEPQ VFDVLTQLVS HHDRCVSKEE 
LFDTVWGGRF VGEAALTSRI KAVRRALGDD GEAQRYIRTV RGRGYRFVGT LHGEDSATPD
EASVEHVVRE TPRQHIAFAR AADGVRLAYA ESGDGPPLVK AANWMTHLGY DSESPVWRHG
VREMSLRYRF IRYDERGCGL SDWDVGDFTF DDWVADLETV VDAVGLDRFH LMGVSQGGAV
AVAYAARHPD KVSRLVLCGA YARGRAVRAL SDDEKRAAAL DLELARVGWG RDDPAFRQVF
AAQFLPDGTR ADWAAFDQLQ RRTTSPENAV HFLEEFARID VRDLCARVQC PTLVLHSRDD
HRVPMRYGEE LASLIPDARL VALSSNNHLL TATEPAWQVF CAEVAAFLV