| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2856 |
|---|
| Symbol | |
|---|
| ID | 4974177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 3018362 |
|---|
| End bp | 3019441 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640457077 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001134121 |
|---|
| Protein GI | 145223443 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.469512 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCC ACGGGGCTAC CGGCAACGCG CTCGACGTCA CCGGGCTAAC CAAGGCCTTC
GGCAGCCACA CCGTGCTGCA CGGCATCGAC CTCGGCGTCA CCGCGGGCAC GATCACCGCC
GTGGTCGGCG CCTCCGGCTG CGGCAAGACC ACGCTGCTGC GTCTGGTCGC CGGCTTCGAG
AACCCCGATG CGGGAACGGT TTCCATCGCC GGACGCCAGG TAGCAGCAGC CGGCAGCAGT
ATCCCCGCGC ATCGCCGCGA CGTGGGCTAC GTCGCGCAGG ACGGCGCGCT GTTCCCGCAC
CTGACCGTGG GCCAGAACAT CGCCTACGGG CTGTCGGGCC GCCGCAACGT CCAGCCGCGC
GTCGCCGAAC TCCTCGCTAC CGTCTCCCTC GACGAGTCCT ACGCCGCACG CCGGCCGCAC
GAACTCTCCG GGGGACAGCA GCAGCGCGTG GCCCTCGCCC GCGCCCTCGC CCGCCAGCCC
GCGCTCATGC TGCTCGACGA ACCGTTCAGC GCCCTGGACA CCGGACTGCG GGCGTCGACC
CGCAAGGCCG TGGCGACGCT GCTCTCCGAC GCCGGCGTCA CGACCCTGAT CGTCACTCAC
GATCAGGAGG AGGCGCTGTC GATCGCCGAC CAGGTCGCGG TGATGCGCGA CGGCCGATTC
ACCAAAGTCG GTACGCCGCA GGCGGTCTAC CGAGAACCCA ACGATCGTTT CACCGCCGAA
TTCCTCGGTG ACTGCGTGCT GCTGCCGTGC ACGGTGACCG GCGGGGTCGC CACCTCGGCA
CTGGGCCGGC TGCCGGTCCG CGGCACCGTA CCCGACGGCG GTGGCACGCT GATGCTCCGC
CCGGAGCAAT TGGAGGCGGC GGCGGTCTCC GACGACGACC GCAGCGACGG GATGGCGACG
GTTCTGGCGT CGGAGTTCCG CGGCCACGAC GTCCTGCTCA CCGTCGACCT CGGCGGCGAC
GCCGCGCCGA TCACCGTCCG TCAGCACAGT GTCGCGCCGC CCGCGGTCGA TGCAAAGGTC
CGCATCCACG TCACCGGTGC CGCCGTGGTG TTCGGCGACC GCCCGCGCGA CGGGCGATGA
|
|---|
| Protein sequence | MTIHGATGNA LDVTGLTKAF GSHTVLHGID LGVTAGTITA VVGASGCGKT TLLRLVAGFE
NPDAGTVSIA GRQVAAAGSS IPAHRRDVGY VAQDGALFPH LTVGQNIAYG LSGRRNVQPR
VAELLATVSL DESYAARRPH ELSGGQQQRV ALARALARQP ALMLLDEPFS ALDTGLRAST
RKAVATLLSD AGVTTLIVTH DQEEALSIAD QVAVMRDGRF TKVGTPQAVY REPNDRFTAE
FLGDCVLLPC TVTGGVATSA LGRLPVRGTV PDGGGTLMLR PEQLEAAAVS DDDRSDGMAT
VLASEFRGHD VLLTVDLGGD AAPITVRQHS VAPPAVDAKV RIHVTGAAVV FGDRPRDGR
|
|---|
| |