| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2204 |
|---|
| Symbol | |
|---|
| ID | 4973526 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2282058 |
|---|
| End bp | 2283605 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640456413 |
|---|
| Product | transposase, IS4 family protein |
|---|
| Protein accession | YP_001133470 |
|---|
| Protein GI | 145222792 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.627915 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.829091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCAGGGTC GCTCTGATGA TCAGCGTGAG TTCTTGGATG CGGAGTCGGT TGCCGGGCAT
CTTCTGAAGT CTGACAGCGT GTTTGCCTTC CTGGCGGCGT ACCGCAGGCA GTTGTTTCCC
GAGGAGATGT TCGCCGATCT GTTCCCGTCG CGGCGGGGCC GTCCCAGCGT GCCTGCCGAA
GTGATGGCTT CGGTGATCAC ATTGCAGGCC TTGCACGGGC TCTCGGATAA CGAGACCGTC
GATGCAGTCA CCTTCGACCT GCGGTGGAAA GCCGCCTGTG GGCTCCCGAT CACCGCTGGA
GCGTTTCATT CCACGACGCT GACGTACTGG CGGCGCCGGT TGGCTGCCTC GGATCGCCCG
AACCGGATCT TCGAGGCGGT CAAGACGGTC GTGGCCGCCA CCGGGGCACT GACCGGCAAG
ACGCGGCGGG CCTTGGACTC CACGATCCTC GACGACGCCG TAGCTACCCA AGACACCGTG
ACCCAGTTGA TCGGCGCGAT CCGCAGAGTG CGACGAGAGG TCCCCGGAGC GGGCGAGGTG
GTGGCGTCCC AGTGCAGCGC CCACGACTAC GACGACCCGG GTAAACCGGC CATCACCTGG
GATGACGCTG CGGCCCGGGA AATGTTGGTC AACGCTTTGG TCACCGATGC CCATCGGCTG
CTGGGTCATC TGCCTGACCA GGAACTCGGC GTCCGCGCCG CTGAGGCGGT GGCGTTGTTG
GCGTTGATCG CCGGCCAAGA CGTCGAACCT GTTGACGATT CTGATGGCAC CGATGGGCGG
TGGCGTATCG CCCAGCGAGT CGCCCAGGAT CGGGTGATTT CCACCGTCGA TCCCGATGCC
CGCCACGCGC ATAAAAGCGT GCACCGCCGC CAAGACGGAT TCAAAGCCCA CATTGCGGTC
GAGCCCGATA CTGGCCTGAT TACCGACTGC GCCTTGACCA AAGCCGGTGG TGCCGGCACC
CACGACGCGG CAGTGGCTCC GCAGTTGCTG GCTGGTGAAA GTGCACCAGT GACAGTGCTG
GCTGATTCGG CCTATGGCAG TGGGGATTTC CGCGCTCAAC TCAGGAAGTC ACGTCATCGC
GATCGGGTCA AACCCGCACC CCTGCGCGCC GCTGTGCCCG GCGGGTTCAC CATCGATGAC
TTCACTGTTG ATCACCGCGG CCATCGCGTG ACCTGCCCAG CGGGAGTGGC TCGGAGCATC
AGCGCACGCG GCAACGCCAC CTTCGGGGCC GCGTGCCGGG GCTGCGCGCT ACGCCCACAG
TGCACCACCA GCATCGACGG CAGAAGCCTG AAAATCGGGC CCCACGACGC ACTTCAACGC
GCTGCCCGTA AGAGGTCACA AAAACCACGG TGGCTCAACG AATATCGTCA ACACCGCCCG
ATGGTGGAAC GCACCATCGC CTGGCTGACA CGCGGCAACC GCAAAGTCCG CTACCGCGGG
GTCACCCGCA ACGATCAATG GCTGCATCAT CGCGCCGCCG CGGTGAACTT ACATCGCCTA
ATCACCCTGG GATTGACCCA CACCGGCGCT GGCTGGGCCA TCGCCTGA
|
|---|
| Protein sequence | MQGRSDDQRE FLDAESVAGH LLKSDSVFAF LAAYRRQLFP EEMFADLFPS RRGRPSVPAE
VMASVITLQA LHGLSDNETV DAVTFDLRWK AACGLPITAG AFHSTTLTYW RRRLAASDRP
NRIFEAVKTV VAATGALTGK TRRALDSTIL DDAVATQDTV TQLIGAIRRV RREVPGAGEV
VASQCSAHDY DDPGKPAITW DDAAAREMLV NALVTDAHRL LGHLPDQELG VRAAEAVALL
ALIAGQDVEP VDDSDGTDGR WRIAQRVAQD RVISTVDPDA RHAHKSVHRR QDGFKAHIAV
EPDTGLITDC ALTKAGGAGT HDAAVAPQLL AGESAPVTVL ADSAYGSGDF RAQLRKSRHR
DRVKPAPLRA AVPGGFTIDD FTVDHRGHRV TCPAGVARSI SARGNATFGA ACRGCALRPQ
CTTSIDGRSL KIGPHDALQR AARKRSQKPR WLNEYRQHRP MVERTIAWLT RGNRKVRYRG
VTRNDQWLHH RAAAVNLHRL ITLGLTHTGA GWAIA
|
|---|
| |