Gene Mflv_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_2164 
Symbol 
ID4973486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp2238823 
End bp2240622 
Gene Length1800 bp 
Protein Length599 aa 
Translation table11 
GC content72% 
IMG OID640456373 
Productextracellular solute-binding protein 
Protein accessionYP_001133430 
Protein GI145222752 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0747] ABC-type dipeptide transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.10806 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGTTGG TGTCCGGCTG TACCGTCAGC CCGCCGCCGG CGCCGCAGAG CACGGACACC 
ACCGAGTCGA CGCCACCGCC CCCGATGAAG GCGACCCAGA TCATCGTCGC GATCGACTCG
ATCGGACCGG GCTTCAACTC GCACCTGCTC TCGGATCAGT CGCCGGTGAA CGCCGCGATC
AGCGCCTTGG TGCTGCCGAG TTCGTTCCGG CCGATCCCGG ATTCACAGAC GCCGACCGGC
TCGCGCTGGG AGATGGACAC CACGCTGCTG GAGTCGGCGG AGGTGACCAG CCAGAACCCG
TTCACGGTCA CCTACAAGAT CCGCCCCGAG GCGCAATGGA CCGACAACGC GCCGATCGGC
GCCGACGACT TCTGGTACCT GTGGCGGCAG ATGGTCAGCC AGCCCGGCGC CGTCGACCCC
GCCGGCTATG ACCTGATCAC CGGTGTGCAG TCCGTCGAAG GCGGCAAGAC CGCGGTCGTC
ACGTTCGCGC AGCCCTACCC GGCCTGGCGT GAGCTGTTCA ACGACATCCT GCCCGCCCAC
ATCGTCAAGG ACGTTCCCGG CGGCTTCTCG GCCGGTCTGG CGCAGGCGCT GCCCGTCACC
GGCGGGCAGT TCCGGGTCGA CACCATCGAT CCGCAGCGCG ATGAGATCCT GCTGGCCCGC
AACGACCGCT ACTGGGGGGT GCCGGCGACG CCGGATCTGA TCCTGTTCCG CCGCGGCGGG
GCGCCGGCCG CGCTCGCCGA CTCGATCCGC AACGGCGACA CACAGGTTGC CCAGGTGCAC
GGCGGCTCGG CCGTCTTCGC GCAGCTGTCG GCGATCCCGG ATGTGCGCAC CGCGCGGATC
GTCACCCCGC GCGTCATGGC GCTGACCCTG CGCGCCCGGC AGCCCGCGCT GAGTGAGGCG
CCCGTCCGCA AGGCGATCCT GGGTCTGCTC GACGTCGATC TGCTGGCCGC CGTCGGCGCC
GGCGACGACA ACACCGTGAC GCTGGCCCAG GCGCAGGTGC GCTCCCCGTC GGATCCCGGG
TACGTCCCGA CCGCGCCGCC TGCGATGACG CGGGACGACG CCCTGTCGCT GCTCGCGCAG
GCCGGCTACG AGGTCGAACC CCTCGAGGTG GCGGGCCAGG CCCCGGGGAA CGGCCGCGGG
CGCATCGCCA GGGACGGCGA GCCGCTGACA CTCGTGCTCG GTGTCGCGGC CAACGACCCG
ACGTCGCTGG CCGTCGCGAA CACCGCCGCC GACCAGTTGC GCAACGTCGG GATCGCGGCC
TCGGTGTCCG CGCTGGACCC GGTAACGCTG TACGGCGAGG CGCTGGTCGA CAACACCGTC
GACGCCGTCG TGGGCTGGCA CCCGGCCGGC GGTGACCTCG CGACCTCGCT GGCGTCGCGC
TACGGCTGCC CCGCGCTGGA GGCCACCGCC GTCCCGACGA CCCCCGGGGC ACCCCCGCCC
GACCCCCCGC CGTCGGAGAC GCCCGGAAGC ACCCCGCCGC CGCGCACGAC CGCGACGCCG
ACCCCGCCGA GTCCGGCACC CGAGTCCGGT GAGCTCGTCC AGGCCCCGAG CAACATCACC
GGGATCTGCG ACCACGCGAT CCAGCCGAGG ATCGACGCCG CGCTGCGGGG CACCGCCGAC
ATCGCCGAGG TGATCGACGA GGTCGAGCCG AGACTGTGGG AGATGTCGAC GGTGCTGCCG
ATCCTGCAGG ACACCACGAT CGTCGCGGCC GGGCCCAGCG TCGAGAACGT CAGCCTGACC
GGAGCGGTAC CGGTCGGCAT CGTCGGCGAC GCCGGCGACT GGGTGAAGCT GCCCCAGTAG
 
Protein sequence
MLLVSGCTVS PPPAPQSTDT TESTPPPPMK ATQIIVAIDS IGPGFNSHLL SDQSPVNAAI 
SALVLPSSFR PIPDSQTPTG SRWEMDTTLL ESAEVTSQNP FTVTYKIRPE AQWTDNAPIG
ADDFWYLWRQ MVSQPGAVDP AGYDLITGVQ SVEGGKTAVV TFAQPYPAWR ELFNDILPAH
IVKDVPGGFS AGLAQALPVT GGQFRVDTID PQRDEILLAR NDRYWGVPAT PDLILFRRGG
APAALADSIR NGDTQVAQVH GGSAVFAQLS AIPDVRTARI VTPRVMALTL RARQPALSEA
PVRKAILGLL DVDLLAAVGA GDDNTVTLAQ AQVRSPSDPG YVPTAPPAMT RDDALSLLAQ
AGYEVEPLEV AGQAPGNGRG RIARDGEPLT LVLGVAANDP TSLAVANTAA DQLRNVGIAA
SVSALDPVTL YGEALVDNTV DAVVGWHPAG GDLATSLASR YGCPALEATA VPTTPGAPPP
DPPPSETPGS TPPPRTTATP TPPSPAPESG ELVQAPSNIT GICDHAIQPR IDAALRGTAD
IAEVIDEVEP RLWEMSTVLP ILQDTTIVAA GPSVENVSLT GAVPVGIVGD AGDWVKLPQ