| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_2001 |
|---|
| Symbol | |
|---|
| ID | 4973323 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 2083511 |
|---|
| End bp | 2084293 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640456210 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001133267 |
|---|
| Protein GI | 145222589 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.480627 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGAC AACGGCTGGC GAGCAAGAGG GTTGTCATCA CCGGCGCGGC GAGCGGCATC
GGCCGCGCAG CCGCCCAGCT GATGATCGGC GAGGGTGCCC GTGTGCTCAT CGCCGACCTC
GACGCCGACG CCGCCGCGGC GGCCGCCTCC GACATCGGCG GCAACGCGAT CGGCGTGGCG
GCCAACGTGC TGGACGACAA ATCGGTGGCC GCCATGATCG ACCGCGCGGT CACCGAGTTC
GGCGGCATCG ACGTGCTGTG CAACCACGTC GGTGGCAGCA ACCCCCACAA GGATCTCGAC
CTGCTGCGCC TGGACCTCGA CGAATGGGAT CGCGCCATGG CGCTCAACGC CCGCAGCACC
GTGGTCGCCT CCCGGCTGGC GCTGCCGCAT ATGATCGCCG AAGGCGGCGG TTCGATCATC
AACACCGTCT CCGTGGCCGG GCTGACGGGC GACACGCTCC AGTGCGCCTA CGGCGCCTCC
AAGGCCGCAG TCATCCGGCT CACGCAGTAC ATCGCCACCC AGTACGGTCG AAAGGGTGTG
CGCTGCAACG CAGTCGCTCC CGGCGCCGTG ATGACACCCG CGCTGGCCGA CAACGTTCCT
GCGGCGGTGA TCGACAACAT TCGCAGCCAC AACGCGCTGG ACCTGATCGG CTCCCCGGAG
GACATCGGCT GGGCCATGGT CTACCTTGCC TCCGACGAAT CCCGTTACAT GACGGGGCAG
ACGCTGGTGC TCGATGGTGG GCTGACCGCC CAGAGCCCGA TCGCGGCCAG CCGCCGGTCG
TAA
|
|---|
| Protein sequence | MTGQRLASKR VVITGAASGI GRAAAQLMIG EGARVLIADL DADAAAAAAS DIGGNAIGVA
ANVLDDKSVA AMIDRAVTEF GGIDVLCNHV GGSNPHKDLD LLRLDLDEWD RAMALNARST
VVASRLALPH MIAEGGGSII NTVSVAGLTG DTLQCAYGAS KAAVIRLTQY IATQYGRKGV
RCNAVAPGAV MTPALADNVP AAVIDNIRSH NALDLIGSPE DIGWAMVYLA SDESRYMTGQ
TLVLDGGLTA QSPIAASRRS
|
|---|
| |