| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1948 |
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| Symbol | |
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| ID | 4973272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Mycobacterium gilvum PYR-GCK |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009338 |
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| Strand | + |
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| Start bp | 2025801 |
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| End bp | 2029397 |
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| Gene Length | 3597 bp |
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| Protein Length | 1198 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640456158 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_001133216 |
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| Protein GI | 145222538 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAT CGGGGACTCT CCATGTCCAT ACCCCGATCG CGGGCCTCGT CGGACTCGCG
CTGCGCGACC CCTCCCTGCA GGAGATCGCA CGCCGTGGCG TCGACCGGCC CGCCGATCTC
CATTTCGTCG GGCCCGCGAG CGCCCGCCTG TTCGTGGCGT CCGCGCTCGC CCAGGCTGGA
CTGCTGCTGG TCGTCACCGC GACGGGACGC GAGGCCGACG ACCTGACCGC AGAGCTGCGT
GGCGTGTTCG GTGACGCGGT GGCGATGTTC CCGTCGTGGG AAACCCTGCC GCACGAACGT
CTCTCACCGG GCGTCGACAC CGTCGGCGCG CGGATGATGC TGCTGCGCCG GCTGGCCTTC
CCCGACGACG CCCGCCTCGG TGAGCCGCTG CGGGTGGTCG TCACCACCGC GCGTTCGCTG
CTGCAGCCGA TGGCGCCGGA CCTGGCCCGG ATCGACCCGG TGACGCTGAC CGTCGGCGGC
GAGGCGGACT TCGACGAGAC GGTCGCGCGG CTGGTCGACC TTGCCTACAC GCGCGTCGAC
ATGGTGGGTA AGCGGGGTGA ATTCGCGGTC CGCGGAGGCA TTCTCGATCT CTTCCCGCCG
ACGGCCGAGC ATCCGGTGCG CGTCGAGTTC TGGGGCGACG AGATCTCCGA GATGAGGATG
TTCTCGGTCG CCGACCAGAG ATCGATCCCG GAGATCGAGA TCGACACCGT CATCGCGGTG
CCGTGCCGTG AGCTCCTGCT GACCGCCGAT GTCCGCGAGC GTGCCGCTGC GCTCGCCGAA
GAGCACCCGG TCTCGGAGAA CAACGTGCCG GGCAGCGTGC CCGACATGCT GGCGCGGCTT
GCCGAGGGCA TCCCGGTCGA CGGGATGGAG GCGCTGCTTC CGTTGTTGCG GCCCAGCGAT
TTCGCCACTC TGCCCGATCA CCTGCCCGAG GGCACCCCGC TGCTGGTGTG CGACCCCGAG
AAGGTCCGCA CCCGCGCCGC CGATCTGATC AAGACCGGGC GCGAGTTCCT TGAGGCGTCC
TGGTCGACGG CCGCCGTCGG CGGGGACGTG CCGATCGACC TCGAGGCGCT CGGCGCGTCC
GGGTACGTGA CCTACAACGA GGCGCGGGAC GCCGCGCGTG ACGGCGGGCA TGGGTGGTGG
ACGCTGAGCC AGCTCGACAG TGGCGCCGGC GAGTCCACCG CCCTCGACAT CCGGCCGGCG
CCGTCGGCGC GTGGCCAGCA CAACCTAGAA GAGATCTTCG CGATGCTGCG CGCCCACGTC
GCGACCGGAG GCTGTGGCGT GGTCGTCACC CCGGGTGCGG GAACCTGCCA GCGGGTCGTC
GAGCAGCTCT CCGAATCGGA CACGCCCGCA ATGATTCTCG AGCCCGGCAT GGCGCCGAAG
GATGGTGTGG TCGGTGTCCT GAAGGGCCCG CTGCACGACG GTGTGGTGAT CCCGGGCGCG
AACCTCGTCG TGATCACCGA GACCGACCTG ACCGGCAACC GGGCCGCGGC CACCGAGGGC
AAGAAGCTGG CGGCCAAGCG CCGCAACGTC GTCGACCCGC TCGCGCTGAC CGCCGGTGAC
CTCGTCGTGC ACGACCAGCA CGGCATCGGC CGCTTCGTCG AGATGACCGA ACGCGTGATC
GGCGGTGCCC GCCGGGAGTA CCTGGTGCTG GAGTACGCGT CGGCCAAGCG CGGCGGCGGG
GCGGACCGGT TGTACGTGCC GATGGACTCA CTCGATCAGC TGTCGCGCTA CGTCGGCGGC
GAGGCGCCGA CGCTGTCACG CCTCGGCGGC AGTGACTGGG CGAACACGAA AACCAAAGCG
CGACGGGCGG TTCGAGAGAT CGCCGCCGAG CTGGTGACGC TGTACGCCAA GCGTCAGGCG
TCACCGGGGC ACGCGTTCTC CCCGGACACC CCGTGGCAGG TCGAGATGGA GGACGCGTTC
GGCTTCACCG AGACCGTCGA TCAGCTCACC GCCATCACCG AGGTCAAGTC GGACATGGAG
AAACCGGTCC CGATGGACCG GGTGATCTGC GGTGACGTGG GGTACGGGAA GACCGAGATC
GCGGTACGGG CGGCGTTCAA GGCCGTACAG GACGGCAAGC AGGTCGCGGT GCTGGTGCCG
ACGACGTTGC TGGCCGATCA GCACCTGCAG ACGTTCACCG CGCGGATGAC CGGTTTCCCG
GTCACCGTCA GGGGCTTGTC GCGGTTCACC GATCCGGCGT CGTCGCGAGC GACGCTCGAA
GGGATGAAGG ACGGTTCGGT CGACATCGTC ATCGGGACGC ACCGGCTGAT CCAGACGGGC
GTGACGTGGA AGGACCTCGG GCTGGTCATC GTGGACGAGG AGCAGCGCTT CGGCGTCGAG
CACAAGGAGC ACATCAAATC GATGCGCACC CACGTCGACG TGCTGACGAT GAGCGCCACC
CCGATCCCGC GCACGCTGGA GATGAGCCTG GCCGGGATCC GCGAGATGTC GACGATCCTG
ACTCCGCCGG AGGAGCGCTA CCCGGTGCTG ACCTACGTCG GGCAGCACGA CGACAAGCAG
GTCGCCGCGG CGCTGCGGCG CGAGATGCTG CGTGACGGGC AGGCGTTCTA CATCCACAAC
CGGGTCCGCA CCATCGACTC GGCAGCGGCG AAGATCCGTC AGCTGGTGCC CGAGGCCCGG
GTTGTCGTCG CCCATGGCCA GATGCCCGAG GAGCAGCTGG AGAAGACCGT CGAGGGGTTC
TGGAACCGCG AGTACGACAT CCTGGTCTGC ACCACGATCG TCGAGACGGG ACTGGACATC
TCGAACGCGA ACACGTTGAT CGTCGAGCGT GCCGATACGT TCGGTCTGTC GCAGCTACAT
CAGCTGCGGG GCCGGGTGGG ACGGTCGCGG GAGCGCGGCT ACGCGTACTT CCTGTACCCG
CCGGAGGTGC CGCTGACCGA GACGGCCTAC GACCGGCTGG CGACCATCGC GCAGAACAAC
GAGCTCGGGG CCGGCATGGC CGTCGCGATG AAGGACCTCG AGATCCGCGG TGCCGGAAAC
GTGTTGGGCG CCGAGCAGTC CGGCCATGTC GCCGGCGTCG GTTTCGACCT GTACGTGCGG
CTGGTCGGCG AGGCCGTAGA AGCATATCGG GCGGCTGCGG ACGGGAAAAC CGTTGCGACA
CCGGAAGAGC CGAAGGATGT GCGGATCGAT CTTCCGGTCG ATGCGCACCT GCCGCCCGAC
TACATCGGCA GCGACCGGTT GCGCTTGGAG GGCTATCGCC GGCTCGCGGC GGCGCCCGAC
GACGCCGCGG TGGACGCGGT CGTCGAGGAA CTCGTGGACA GGTACGGGCC GCTGCCCGAA
CCGGCGGAGT TGCTGGTGGC GGTGGCGCGG CTGCGCCTGC TGGCGCGTGC GGCGGGTATC
ACCGAGGTCG GTGCGGTGTC GGCGTCGGCG TCGACGCTGC GGATCTCTCC GCTGACCCTG
CCGGACTCGG CGCAACTGCG GCTCAAGAGG CTCTACTCGG GCGCGAACTA TCGCGCCACC
ACCTCGACGG TCCAGGTGCC GATCCCGCGG GCGGGGCAGG GGGTCGGTGC CCCGCGGATC
CGCGACCGGG AGCTGGTGGA CTTCGTCGCC GGTCTGATCA AGGTGCTGGG CGAGTAG
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| Protein sequence | MTASGTLHVH TPIAGLVGLA LRDPSLQEIA RRGVDRPADL HFVGPASARL FVASALAQAG
LLLVVTATGR EADDLTAELR GVFGDAVAMF PSWETLPHER LSPGVDTVGA RMMLLRRLAF
PDDARLGEPL RVVVTTARSL LQPMAPDLAR IDPVTLTVGG EADFDETVAR LVDLAYTRVD
MVGKRGEFAV RGGILDLFPP TAEHPVRVEF WGDEISEMRM FSVADQRSIP EIEIDTVIAV
PCRELLLTAD VRERAAALAE EHPVSENNVP GSVPDMLARL AEGIPVDGME ALLPLLRPSD
FATLPDHLPE GTPLLVCDPE KVRTRAADLI KTGREFLEAS WSTAAVGGDV PIDLEALGAS
GYVTYNEARD AARDGGHGWW TLSQLDSGAG ESTALDIRPA PSARGQHNLE EIFAMLRAHV
ATGGCGVVVT PGAGTCQRVV EQLSESDTPA MILEPGMAPK DGVVGVLKGP LHDGVVIPGA
NLVVITETDL TGNRAAATEG KKLAAKRRNV VDPLALTAGD LVVHDQHGIG RFVEMTERVI
GGARREYLVL EYASAKRGGG ADRLYVPMDS LDQLSRYVGG EAPTLSRLGG SDWANTKTKA
RRAVREIAAE LVTLYAKRQA SPGHAFSPDT PWQVEMEDAF GFTETVDQLT AITEVKSDME
KPVPMDRVIC GDVGYGKTEI AVRAAFKAVQ DGKQVAVLVP TTLLADQHLQ TFTARMTGFP
VTVRGLSRFT DPASSRATLE GMKDGSVDIV IGTHRLIQTG VTWKDLGLVI VDEEQRFGVE
HKEHIKSMRT HVDVLTMSAT PIPRTLEMSL AGIREMSTIL TPPEERYPVL TYVGQHDDKQ
VAAALRREML RDGQAFYIHN RVRTIDSAAA KIRQLVPEAR VVVAHGQMPE EQLEKTVEGF
WNREYDILVC TTIVETGLDI SNANTLIVER ADTFGLSQLH QLRGRVGRSR ERGYAYFLYP
PEVPLTETAY DRLATIAQNN ELGAGMAVAM KDLEIRGAGN VLGAEQSGHV AGVGFDLYVR
LVGEAVEAYR AAADGKTVAT PEEPKDVRID LPVDAHLPPD YIGSDRLRLE GYRRLAAAPD
DAAVDAVVEE LVDRYGPLPE PAELLVAVAR LRLLARAAGI TEVGAVSASA STLRISPLTL
PDSAQLRLKR LYSGANYRAT TSTVQVPIPR AGQGVGAPRI RDRELVDFVA GLIKVLGE
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