Gene Mflv_1914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1914 
Symbol 
ID4973238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1990405 
End bp1991499 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content69% 
IMG OID640456123 
Productdiguanylate cyclase 
Protein accessionYP_001133182 
Protein GI145222504 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.136216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.291569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCGGG ATCAGCGGCA CTCGGACCAC TACGAGTGGT TCAGCGACTT CCTCCAGGCC 
CGGGGCGTCG CGGTGTACGT GCGTGCCGGT GTCGCGGCGA TCGGGCTGTT GATGGCGGTC
TCGTCGGTCA TCCTCGTCCT CGGAGCCGGC GGACCGACGA GCCAACCGCA GGTCGCGATG
ATGTGGGTGG CGGCAGCCGG CGGTGTCGCG AGCGCGGCGC TGTGGGTGCG GCGATGGCCC
ACCCGAGGGC AGTCAGCGGC CTTCGCGGCG GTCACGACGT GTTCGATCAC GTTGGCGTGT
CTGGCGTATC CGGATGCACT GGCTGCACTG CTGGGATGCA TCACGTTCAT GACCATCGGC
GCGTATCTGG CGTTCTTCCA CTCGACGCGC TCGGTGCTCG GCGTCGTCGC GCTCGCGATC
GTGGTCGCCT CCCTTCATGC CGTGGAGCTG GCGGTGGCCG GCCGACCGGC ACTGGCCGCG
GTCGATCTGT TCATCGTGGT GCAGGCGAAC CTGGCGATGC CGCTGGCGAT TCACAGCCTG
CTGCGGGCGC TGCGCGGCGA CCTGGTCCAC GCCCTGACCG ACGCGAACCA CGACCCCCTC
ACCGGCCTGC TGAACCGGCG CGCGTTCCGC ACCCAGACCC TGGGCCTGTT CGAACGCGGC
GGGGACGGAC ACCATCTCGT CGTCGCGCTC ATCGACCTCG ACAAGTTCAA GGCCCTCAAC
GACACTCACG GACATCACGT CGGTGACCAG GCGCTGGTCG CGGTCGCCGA CGCCCTGCGC
GCCACAGCGA CGTCGAGCGC CGTGATCAGT CGCAGCGGAG GCGAGGAATT CCTGATCGCC
GACGTCGCGC CCGCAGACGA GGCGCTGGCG CGCTATCAGG GGCTCTGCGA TGCGGTCGCC
GCACTGCACA TCCCCGTGAC CGCCAGTGTC GGGACGGCGA CCGCCGCACT CGACGTCGTG
TCCGATCACG ACCCCGACGG CGTCGTCGAT CACCTCATCG CCGCGGCGGA CATGGCGATG
TACCGTGCAA AACGAAACGG CGGCAACCAA TGTCACCACC ACGGCAGCTG GCCGACCCTC
GGCTCGCCGC CATGA
 
Protein sequence
MQRDQRHSDH YEWFSDFLQA RGVAVYVRAG VAAIGLLMAV SSVILVLGAG GPTSQPQVAM 
MWVAAAGGVA SAALWVRRWP TRGQSAAFAA VTTCSITLAC LAYPDALAAL LGCITFMTIG
AYLAFFHSTR SVLGVVALAI VVASLHAVEL AVAGRPALAA VDLFIVVQAN LAMPLAIHSL
LRALRGDLVH ALTDANHDPL TGLLNRRAFR TQTLGLFERG GDGHHLVVAL IDLDKFKALN
DTHGHHVGDQ ALVAVADALR ATATSSAVIS RSGGEEFLIA DVAPADEALA RYQGLCDAVA
ALHIPVTASV GTATAALDVV SDHDPDGVVD HLIAAADMAM YRAKRNGGNQ CHHHGSWPTL
GSPP