Gene Mflv_1894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1894 
Symbol 
ID4973218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1973902 
End bp1974555 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content76% 
IMG OID640456102 
ProductSAF domain-containing protein 
Protein accessionYP_001133162 
Protein GI145222484 
COG category[N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1261] Flagellar basal body P-ring biosynthesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.832512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.097517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAATC CGCTGGATCC GTCGCCACTG CACCGGGTGA GCCGTGCGCT GCGTCCGGAC 
TGGTCACGAA CGCCGGCGGC ACGTCGGGTA CTCGCCGGGC TGCTGGTCGT CCTGGCTGCG
GTGGCCGCAT GGCGCGGCGA TCCTGACGCG GACCGCTCCG AGGTGGTCGT CACCGTGCGA
GATCTGGCGC CGGGGGTCGC GCTCACCGCC GCCGATGTCC GCGTGGAGTC CCGCGCGGCA
CCACTGCTCC CGGACGGCGC CCTCACCGAC GTCGACGAGG TCGTCGATGC GACGCTCGCG
GGTCCGGCGC GCCAGGGCGA GGTCCTCACC GACGTCCGCC TGCTGGGGCC GCGACTCGCC
CGATCCGCGG CCGGGCCCGA CGCACGGATC GTCCCCATCC CGCTGGCCGA CGCGGCACTG
GTGGATCTGG TCAGGCCGGG CGACGTCGTC GACATCGTCG CCGCACCCGC CGACGACGCG
GTCGCCGCAC GGACGGTGGC CACCGACGCC ATCGTGGTGC TGGTGTCCGC CGCGGAGAAC
GGCATCGGGG CGCGGGCGGG CGGGCGGGTG GTGCTCGTGG CCCTGCCCGC CGCCGGCGCC
GAGAGGGTGG CCGGGGCTGC GCTCGTCGAG GCGATCACGC TGACCCTGCA CTGA
 
Protein sequence
MGNPLDPSPL HRVSRALRPD WSRTPAARRV LAGLLVVLAA VAAWRGDPDA DRSEVVVTVR 
DLAPGVALTA ADVRVESRAA PLLPDGALTD VDEVVDATLA GPARQGEVLT DVRLLGPRLA
RSAAGPDARI VPIPLADAAL VDLVRPGDVV DIVAAPADDA VAARTVATDA IVVLVSAAEN
GIGARAGGRV VLVALPAAGA ERVAGAALVE AITLTLH