| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1384 |
|---|
| Symbol | |
|---|
| ID | 4972710 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 1440070 |
|---|
| End bp | 1441239 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640455587 |
|---|
| Product | type II secretion system protein E |
|---|
| Protein accession | YP_001132654 |
|---|
| Protein GI | 145221976 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.192887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.335335 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTC CGCTGGTCGA CCGGGTCCGG GAACGACTCG CCCAGGAGAC GGCCCCGCTT
CGGCCGAGCG TCGTCGCTGC CGCGATCCGT GCGGAGTCCG GTGGCGTGCT CGGCGATGCC
GAGGTGCTGA GGAGTCTGCG CGAGTTGCAG ACCGAGCTCA CCGGTGCCGG CGCGCTCGAT
CCGCTGCTGT CGGCCCCCGG CACCACCGAC GTGCTCGTGA CGGCCCCGGA TGCGGTGTGG
ATCGACGACG GCCGCGGTTT GCGGCGCACC TCGGTGCGAT TCGCTGACGA GGCCGCGGTG
CGCCGGCTCG CCCAACGGCT GGCGCTGACC GCGGGCCGGC GTCTCGACGA GGCCCAGCCG
TGGGTGGACG GGCATCTGCT CGCGCCGGGC CCGGGCGGGC AGCTCACCGT GCGGTTGCAC
GCGGTACTGC CCCCGGTCGC GGCGGCGGGC ACCTGCCTGT CGCTACGGGT GCTGAGGCCG
GCCAACCAGA ACCTCGACGC GCTGACCAGC GCGGGAACCC TCACCCCCGA AGCCGCCGGA
CTGCTGCGCG ACATCCTCGC CGCGAGGCTC GCGTTCGTCG TCTCCGGAGG AACGGGCGCC
GGCAAGACGA CCCTGTTGGC GGCGCTGCTG GCCGCGGTGC CGCACACCGA GCGCATCGTC
TGCGTCGAAG ACGCCGCCGA GCTCGCGCCG GATCATCCGC ATCTGGTGAA ACTCGTCGCG
CGCGGCGCCA ACGTCGAAGG GGCCGGGGAA GTCACGGTGC GCGACCTGGT CCGGCAGGCG
CTGCGGATGC GTCCCGACCG CATCGTGATC GGCGAGGTCC GGGGACCCGA GGTGGTCGAC
CTGCTCTCGG CGCTGAACAC CGGACACGAC GGCGGCGCGG GCACCGTGCA CGCGAACAGC
CCGGCGGAGG TGCCGGCCCG CTTCGAGGCG CTCGCCGCGC TCGGCGGGCT CGACCGTGCG
GCGCTGCACA GCCAGCTCGC CGCCGCGATC CAGGTGGTGT TGCACGTCGC TCGCGACCGT
GCGGGTCGGC GACATCTCGC CGAGATCGGG CTGCTGTACC GGGCCGGGGG CGGCAGCGTC
GACGTCGTGC GGTGCTGGCA CCGGGACGAC GGCTTCGGCC GAGGCGCCGG GGAGCTACGC
GCCCTGCTTC GCGCCAGGGA CGGGTCATGA
|
|---|
| Protein sequence | MSAPLVDRVR ERLAQETAPL RPSVVAAAIR AESGGVLGDA EVLRSLRELQ TELTGAGALD
PLLSAPGTTD VLVTAPDAVW IDDGRGLRRT SVRFADEAAV RRLAQRLALT AGRRLDEAQP
WVDGHLLAPG PGGQLTVRLH AVLPPVAAAG TCLSLRVLRP ANQNLDALTS AGTLTPEAAG
LLRDILAARL AFVVSGGTGA GKTTLLAALL AAVPHTERIV CVEDAAELAP DHPHLVKLVA
RGANVEGAGE VTVRDLVRQA LRMRPDRIVI GEVRGPEVVD LLSALNTGHD GGAGTVHANS
PAEVPARFEA LAALGGLDRA ALHSQLAAAI QVVLHVARDR AGRRHLAEIG LLYRAGGGSV
DVVRCWHRDD GFGRGAGELR ALLRARDGS
|
|---|
| |