Gene Mflv_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMflv_1376 
Symbol 
ID4972702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium gilvum PYR-GCK 
KingdomBacteria 
Replicon accessionNC_009338 
Strand
Start bp1430842 
End bp1432035 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content70% 
IMG OID640455579 
Productcolicin V production protein 
Protein accessionYP_001132646 
Protein GI145221968 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0302787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.112476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCT CACAATGGCT TGATATCGCG ATCCTCGCCG TGGCGATGCT CGCTGCCGTC 
TCGGGCTGGC GCTCAGGGGC GCCCGGCTCG TTGATGGCGC TGGTCGGCGT CGTGCTGGGT
GCGGGCGCGG GGATCCTGCT GGCGCCGCAC GTGGTGGACC ACATCAGTGG GCCCCGCACC
AAGCTGTTCG CCACCCTGTT CCTGATCCTG GTGCTCGTGG TGATCGGCGA GATCGCCGGC
GTCGTCCTCG GCAGAGCGGT CCGGGGCGCC ATCCGCAACC CCGGCCTGCG AATCGTCGAC
TCCGTCGTGG GCGTCGCGTT GCAGCTGGTG CTGGTGCTCA CCGCCGCATG GCTGCTCGGC
ACGGCCCTGG TGTCGTCGCC GCAACCCAAC CTGGCCGCCG CCGTCTCGGG TTCCCGGGTC
ATCGCCGAAG TCGACGCCGT GGCGCCGGAC TGGCTGCGTT CGGTACCCGA CCGGATGTCG
TCGGTGTGGG AGAACGCGGG CCTGCACGAC GTCCTCAAAC CGTTCGGCCC CACCCCCGTC
GCCGCCGTCG ACGCGCCCGA CCCGGCTCTG GCCACCTCGC CGGTGGTCAA CCAGACGCGC
TCCAGCGTGG TCAAGGTCAA GGGTGTCGCC CAGAGCTGCC AGAAGGTCCT GGAGGGCACC
GGGTTCGTGG TCGCCCCCAA CCGGGTGATG TCGAACGCCC ACGTCGTCGC GGGATCCGAC
ACCGTCACCG TCGAGGTGGA CGGCCAGGAG TACACCGCCG GCGTGGTGTC CTACGACCCG
AACGCCGACA TCTCGATCCT CGACGTTCCG GACCTGCCGT CGGTGCCGCT GCAGTTCGTC
GACGCGCTGG CCCAGACCGG CACCGACGGC ATCGTGCTCG GCTATCCCGG CGGCGGCGAT
TTCACCGCGA CGCCGGCCCG TGTCCGCGAG GTCATCGAGC TCAATGGCCC CGACATCTAC
CGCTCGACCA CCGTGACCCG CGAGGTGTAC ACGATCAGGG GCACGGTGCG ACAGGGCAAT
TCGGGCGGTC CGATGGTCAA CAGGCAGGGC AAGGTGCTCG GGGTGGTGTT CGGCGCCGCG
GTCGACGACA TCGACACCGG CTTCGTGCTC ACCGCCGACG AGGTGGCCGC TCAGATGGCC
AGGGTCGGCA ACGTCGACCT GGTCCCGACG GGGACGTGCA TCAGCTCGGG CTAG
 
Protein sequence
MNSSQWLDIA ILAVAMLAAV SGWRSGAPGS LMALVGVVLG AGAGILLAPH VVDHISGPRT 
KLFATLFLIL VLVVIGEIAG VVLGRAVRGA IRNPGLRIVD SVVGVALQLV LVLTAAWLLG
TALVSSPQPN LAAAVSGSRV IAEVDAVAPD WLRSVPDRMS SVWENAGLHD VLKPFGPTPV
AAVDAPDPAL ATSPVVNQTR SSVVKVKGVA QSCQKVLEGT GFVVAPNRVM SNAHVVAGSD
TVTVEVDGQE YTAGVVSYDP NADISILDVP DLPSVPLQFV DALAQTGTDG IVLGYPGGGD
FTATPARVRE VIELNGPDIY RSTTVTREVY TIRGTVRQGN SGGPMVNRQG KVLGVVFGAA
VDDIDTGFVL TADEVAAQMA RVGNVDLVPT GTCISSG