| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_1352 |
|---|
| Symbol | |
|---|
| ID | 4972678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | - |
|---|
| Start bp | 1406260 |
|---|
| End bp | 1408311 |
|---|
| Gene Length | 2052 bp |
|---|
| Protein Length | 683 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640455554 |
|---|
| Product | tetratricopeptide TPR_4 |
|---|
| Protein accession | YP_001132622 |
|---|
| Protein GI | 145221944 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.394592 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCCTG TCACGTTCGT CGGTCGCTCC GGTGACCTCG ACGAGTTGAT CCGGCGGACG
GCGGCGACGG TGAGCGACGG GTCCGCCGTC GTCACGGTCC GGGGCGCCCC GGGGATCGGG
AAGACCGCGC TGCTCCGGCA GGTCGCCGCC ACGGTCCCGA ACTCCCGGTG GGCCACCGCG
GTGCCGTGGG AGAGCACCGT CGACGGCGCG GTGCTGTCGC AGCTGTCCCC CGAACCCGGA
GCCGAACAGC TGGCCCGCGC GCTCGCCGGC GACGATCCGA CCCTGCTCGT CGTCGACGAC
GCGCAGCACG CCGATTCGGC GTCGCTGCAG GCGCTTTCGA CACTGATACG CCACCACCGG
TCGCTACCGG TGCTCCTCGT CCTGGTGACC GACGGGCACC CGCTGCCTGT CCCGGGGCTG
GACGGTGACG AGCTGGTGAT GACCGGGCTG GACGTTCGCG AGGTGGCCGC GCTCGCCTCG
GCGCGCGGGC ATGTGCTGCC GGCGCTGATG GTGGACCGCC TCACCCGTCA CACCGCGGGC
CACCCCGGCC ATGTGCGGGC CCTGCTCGAC GAGCTCCCGG CGCAGACGTG GAGCCGGCTG
GACGCCCCGC TGCCCGCCCC GCGGGAGGTC GTCGCACAGG TCGAGCGGGA GCTGGCCGCG
GCGGGTGACG GCGGACGGGC GCTGGCGTTC GCGCTCGCCG TCCTCGGCGA GGAGGCGACG
CTGTCGGAGG CCGTCCTGCT CGCCGGCATC GACGACCCGT TGGCCGCCGT GGCGGCGGCG
ACCGGCGCCG GCCTGGTGCG TACCGGTGAC CCGCTGGAGC CGCGGTTGCG CGATCCGCTC
GCCGCGGCAG CCGTACTCGA CGTGTGCGGT GTGCAGGCGA CGGCGGACGC TCATCGCCGT
GCCGCCGACG TCGTCACCGA TCCTGTTGCG CGGCTTCGTC ATCGCGTCGC GGCCACCCCC
GTTCCCGACG AGGCGCTGGC CGACGAGGTG GATGCGCTGG CCCGTTCGTC GGGCGCCGAC
GGCGAGTGGA GCCGCGCCGC CGTGCTGTTC CGTGACGCGG CCCGGCTGAC GGCCGCCCCA
CTGCTGCGTG ACGAACGGCT CACGCGTTCG GTCGATGCGC TGGTGGCCGC CGGGGACTGC
GTGGGCGCGG CGGCGATGGT GCCGACCGTG GAGAATCTGC GCGAAACCCC TTTGCGCAAC
GCCACATTGG CCTACCTGGC GATCCTGCGG GGCCGCGCCA CCGAGGCCGA GGTGCGGCTG
CGTCGCGCCT GGGACATCGT CCACATCGAC CGCGACACCG ACACCGCGGC GTTCATCGCC
CAGCGTCACG TCCTGCACGC ACTCGTCCAC TGTCAGGGCG AGGAGTTGGT GGCCTGGGCC
GATCGCGCGC TGGCGCTCGC GGAGCGCGAC TCCCCGGCGG GCATCGAGGC CGCCGCGATC
CGCGGGCTGG GCCTGCTGGC GTCCGGGCAG CCGCGCCGCG CCGCCGCAGA GTACGACGAC
CTGCACGAGC GGGTCCGGCA CGGGGCGCAG GCACAGCGCG TCGTGATGGG GCGCGGATGG
GTTCAGCTCA TGCGCGACGA CGTCGAGGGC GCCCGGTCCA GTCTCGAAAG TGCCGTCGCG
GCCGCAGGTC TCGGCGGTTC GACGCGCATC ACGCTGTGGT CGCACGCGTG GCTGGCCCGA
ACCCAGTTCA GCCTCGGGGA GTGGGACGCG GCACTGGCGA GTGTGGCGCA CGGCCGTCGG
CTGGCCGAGA CGAGCGGAAT CGTTTTGGTC ACACCGCTGC TCGAGTGGAC CGCCGGACAG
ATCGCCGCGT TGCGCGGCGA CTGGGAAACT GCGCACGCGG CGGCGCACGC CGCTGCGGGG
GGTGGCGAGT ACGCGATGAT GCGCATCCCG GCGCTGCTGG TGCGCGCGCA GATCGCCGAG
GCGCAGGCGG ACTACGCCAC GGTTCGCCGT GTTCTGGAGC CGCTCACGAC GCTGGCCCCC
GGCACCTCGC TGCAGGCCGG GGTACTGGCC GTGGGTCGAC GCCCTGGCCA ACGCGATGGT
GCTCACCGGT GA
|
|---|
| Protein sequence | MAPVTFVGRS GDLDELIRRT AATVSDGSAV VTVRGAPGIG KTALLRQVAA TVPNSRWATA
VPWESTVDGA VLSQLSPEPG AEQLARALAG DDPTLLVVDD AQHADSASLQ ALSTLIRHHR
SLPVLLVLVT DGHPLPVPGL DGDELVMTGL DVREVAALAS ARGHVLPALM VDRLTRHTAG
HPGHVRALLD ELPAQTWSRL DAPLPAPREV VAQVERELAA AGDGGRALAF ALAVLGEEAT
LSEAVLLAGI DDPLAAVAAA TGAGLVRTGD PLEPRLRDPL AAAAVLDVCG VQATADAHRR
AADVVTDPVA RLRHRVAATP VPDEALADEV DALARSSGAD GEWSRAAVLF RDAARLTAAP
LLRDERLTRS VDALVAAGDC VGAAAMVPTV ENLRETPLRN ATLAYLAILR GRATEAEVRL
RRAWDIVHID RDTDTAAFIA QRHVLHALVH CQGEELVAWA DRALALAERD SPAGIEAAAI
RGLGLLASGQ PRRAAAEYDD LHERVRHGAQ AQRVVMGRGW VQLMRDDVEG ARSSLESAVA
AAGLGGSTRI TLWSHAWLAR TQFSLGEWDA ALASVAHGRR LAETSGIVLV TPLLEWTAGQ
IAALRGDWET AHAAAHAAAG GGEYAMMRIP ALLVRAQIAE AQADYATVRR VLEPLTTLAP
GTSLQAGVLA VGRRPGQRDG AHR
|
|---|
| |