| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mflv_0955 |
|---|
| Symbol | |
|---|
| ID | 4972283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium gilvum PYR-GCK |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009338 |
|---|
| Strand | + |
|---|
| Start bp | 1001004 |
|---|
| End bp | 1002254 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640455153 |
|---|
| Product | D-amino-acid dehydrogenase |
|---|
| Protein accession | YP_001132227 |
|---|
| Protein GI | 145221549 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.249989 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTCCA TGAGTGAACG GAGCGGCGGT CGACCGCAGC GGGTGGTGGT CGTCGGGGCG
GGCATGGTCG GCCTGAGCAC GGCGTGGTAC CTGCAGGAGC ATGGCGTGGA GGTCACCGTG
GTCGACTCCG ATGGGGTGGC GGCGGGATCG AGCTGGGGCA ACGCGGGCTG GCTGACGCCC
AGCATCGCGA CGCCGCTACC GGAGCCGGCG GTCCTGAGGT ACGGGGTGCG CGCGCTGTTG
AGCCCGTCAT CCCCGGTGTA TGTGCCGCTG ACCGCCGATC CCCGGCTGAT CGGCTTCCTG
CTGCGGTTCG CCCGCAACTC GACGGCCTCG CGCTGGCAGA AGGCCATGAA GGCGCTGATC
CCGCTGAACC GGGACGCGCT GGCCGCGTTC GACCGGATGG AGGTGCAGTC GAGCGAACAA
TCCAGTCCGG CAGAGCCTTT CATCGCCGCG TACCGAACGG CAGCCGACCG CGAGGTGCTT
CTGGAGGAGT TCGCGCAGAT CCGCGCGGCC GGGCAGTCGG TGAACTTCGA GGTGCTCGAC
GGCGCGACCG CACGCGCCCA GGAACCCGCG CTGTCCCCGG AGGTCGACGC GGCCATCGCG
ATTCACGACG AGCGGTTCGT GAACCCGTCC GCCTACGTCG ACGCCCTCGC CGCGCAGGTG
CTCGCCCGTG GCGGCCGCAT CGAGGCCGGT GTCGACGTCG ACTCGGTCTC GGACACCGGT
GACGGCGTCC GGGTCGCCGG ACAGCGGTAC GACGCGGCCG TCGTCGCCAC CGGCGCGCGG
CTCAACAAAC TCCTCGCGCC GTTCGGCGTC CGGCGAACGG TACAGGCAGG ACGCGGCTAC
AGCTTCACCG TCAAGGTGGA CCACCTGCCG CGCGGCCCGG TGTACTTCCC GACCCAGCGC
GTCGCGTGCA CACCCGTCGG CGACCGGCTG CGGATCGCCG GGATGATGGA GTTCCGCGCC
GTCGACGCGC CCCTGGACCC CCGCCGCATC GAGGTGCTCA AGAACGCCGC CGGCGAGCTG
TTGACCGGCG CCCACCTCGA CACCCGCGAG GACGAGTGGG TGGGCGCACG TCCGTGCACG
GCCGACGGCC TGCCGTTGAT CGGCCGCACC CGGAGTTCCC GGGTCTTTGC GGCGGGCGGT
CACGGCATGT GGGGTATCAC GCTGGGACCC GTGACGGGCA GGCTGCTGGC CGAGCAGATC
GTCACCGGCC GGACGCCGGA CGCGCTTCGC GCGGTCGATC CGCTCCGCTG A
|
|---|
| Protein sequence | MESMSERSGG RPQRVVVVGA GMVGLSTAWY LQEHGVEVTV VDSDGVAAGS SWGNAGWLTP
SIATPLPEPA VLRYGVRALL SPSSPVYVPL TADPRLIGFL LRFARNSTAS RWQKAMKALI
PLNRDALAAF DRMEVQSSEQ SSPAEPFIAA YRTAADREVL LEEFAQIRAA GQSVNFEVLD
GATARAQEPA LSPEVDAAIA IHDERFVNPS AYVDALAAQV LARGGRIEAG VDVDSVSDTG
DGVRVAGQRY DAAVVATGAR LNKLLAPFGV RRTVQAGRGY SFTVKVDHLP RGPVYFPTQR
VACTPVGDRL RIAGMMEFRA VDAPLDPRRI EVLKNAAGEL LTGAHLDTRE DEWVGARPCT
ADGLPLIGRT RSSRVFAAGG HGMWGITLGP VTGRLLAEQI VTGRTPDALR AVDPLR
|
|---|
| |